Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Msh6P54276 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Msh6P54276 Gm7842-201ENSMUST00000217691 1379 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Rab11b-201ENSMUST00000057373 6109 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.5□□□□□ -0.89
Msh6P54276 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.5□□□□□ -0.89
Msh6P54276 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Gm38200-201ENSMUST00000192083 2111 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.89
Msh6P54276 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Btn2a2-201ENSMUST00000041541 2226 ntTSL 2 BASIC9.5□□□□□ -0.89
Msh6P54276 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Msh6P54276 Gm12635-201ENSMUST00000117285 752 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Msh6P54276 Gm11320-201ENSMUST00000119434 463 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm12593-201ENSMUST00000120981 743 ntBASIC9.5□□□□□ -0.89
Msh6P54276 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC9.5□□□□□ -0.89
Msh6P54276 Gm25640-201ENSMUST00000175378 125 ntBASIC9.5□□□□□ -0.89
Msh6P54276 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Gm37017-201ENSMUST00000195266 747 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Gm4247-201ENSMUST00000211441 1042 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm9985-201ENSMUST00000044101 510 ntBASIC9.5□□□□□ -0.89
Msh6P54276 n-R5s29-201ENSMUST00000082836 119 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm24036-201ENSMUST00000082868 156 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Nlrp3-201ENSMUST00000079476 3933 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Gm37891-201ENSMUST00000195585 1326 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Mrps17-203ENSMUST00000119576 5061 ntAPPRIS P1 TSL 2 BASIC9.49□□□□□ -0.89
Msh6P54276 Gm37499-201ENSMUST00000194683 3478 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Lsamp-202ENSMUST00000099761 8794 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
Msh6P54276 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Ctage5-208ENSMUST00000175877 2612 ntTSL 5 BASIC9.49□□□□□ -0.89
Msh6P54276 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Ctnnd1-216ENSMUST00000111690 5945 ntTSL 5 BASIC9.49□□□□□ -0.89
Msh6P54276 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
Msh6P54276 2900027M19Rik-201ENSMUST00000207411 4448 ntBASIC9.49□□□□□ -0.89
Msh6P54276 AI427809-203ENSMUST00000123127 2033 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Tpo-201ENSMUST00000021005 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC9.49□□□□□ -0.89
Msh6P54276 Cst8-202ENSMUST00000109947 804 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
Msh6P54276 Gm12713-201ENSMUST00000118404 764 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.49□□□□□ -0.89
Msh6P54276 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC9.49□□□□□ -0.89
Msh6P54276 Gm24057-201ENSMUST00000158616 302 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Gm5656-201ENSMUST00000171020 1096 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Gm24155-201ENSMUST00000175259 110 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Gm28807-201ENSMUST00000187799 471 ntTSL 2 BASIC9.49□□□□□ -0.89
Msh6P54276 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC9.49□□□□□ -0.89
Msh6P54276 Gm4525-201ENSMUST00000198831 254 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Gm42734-201ENSMUST00000201656 878 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Gm34583-203ENSMUST00000202586 454 ntBASIC9.49□□□□□ -0.89
Msh6P54276 AC133948.2-201ENSMUST00000217850 378 ntBASIC9.49□□□□□ -0.89
Msh6P54276 AC163621.1-201ENSMUST00000220695 379 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC9.49□□□□□ -0.89
Msh6P54276 CT025639.2-201ENSMUST00000224440 1220 ntBASIC9.49□□□□□ -0.89
Msh6P54276 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Gpr87-201ENSMUST00000056898 1080 ntBASIC9.49□□□□□ -0.89
Msh6P54276 3110018I06Rik-201ENSMUST00000082269 1005 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Msh6P54276 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
Msh6P54276 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC9.49□□□□□ -0.89
Msh6P54276 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Gm44289-201ENSMUST00000204144 1390 ntBASIC9.48□□□□□ -0.89
Msh6P54276 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Helz2-203ENSMUST00000121484 10063 ntTSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 Tbc1d14-215ENSMUST00000146430 4582 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Tbc1d14-201ENSMUST00000031094 4590 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Gm45354-201ENSMUST00000199820 2557 ntBASIC9.48□□□□□ -0.89
Msh6P54276 Tmcc1-203ENSMUST00000172510 2612 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Gm15448-201ENSMUST00000094911 1557 ntTSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 Ap5m1-201ENSMUST00000037473 6321 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 Musk-207ENSMUST00000177951 3352 ntTSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 Musk-204ENSMUST00000098059 3352 ntTSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
Msh6P54276 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
Msh6P54276 Iars-201ENSMUST00000047363 4396 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms