Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC154382.1-201ENSMUST00000220958 1282 ntBASIC8□□□□□ -1.13
Shmt1P50431 AC132590.1-201ENSMUST00000224374 1164 ntBASIC8□□□□□ -1.13
Shmt1P50431 AC154838.3-201ENSMUST00000228876 965 ntBASIC8□□□□□ -1.13
Shmt1P50431 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC8□□□□□ -1.13
Shmt1P50431 Olfr510-201ENSMUST00000076289 945 ntAPPRIS P1 BASIC8□□□□□ -1.13
Shmt1P50431 Gm25926-201ENSMUST00000082899 160 ntBASIC8□□□□□ -1.13
Shmt1P50431 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm9256-201ENSMUST00000198106 1420 ntBASIC8□□□□□ -1.13
Shmt1P50431 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 Gm44950-201ENSMUST00000206403 2296 ntBASIC8□□□□□ -1.13
Shmt1P50431 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm17841-201ENSMUST00000210711 2425 ntBASIC8□□□□□ -1.13
Shmt1P50431 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8□□□□□ -1.13
Shmt1P50431 D3Ertd254e-202ENSMUST00000197653 6689 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm5903-201ENSMUST00000121836 2325 ntBASIC8□□□□□ -1.13
Shmt1P50431 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 Gm9877-201ENSMUST00000064271 2627 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC7.99□□□□□ -1.13
Shmt1P50431 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Shmt1P50431 Sorbs2-201ENSMUST00000067065 6337 ntTSL 5 BASIC7.99□□□□□ -1.13
Shmt1P50431 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Celf5-204ENSMUST00000120856 3861 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Cenpc1-201ENSMUST00000031170 3192 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Shmt1P50431 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC7.99□□□□□ -1.13
Shmt1P50431 Cd44-204ENSMUST00000111190 1412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
Shmt1P50431 Gm15209-201ENSMUST00000117703 400 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Gm4732-201ENSMUST00000118778 473 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Shmt1P50431 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Gm24893-201ENSMUST00000122745 369 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Gm24011-201ENSMUST00000157732 268 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Mir1981-201ENSMUST00000157934 82 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Gm25692-201ENSMUST00000175444 125 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Gm19815-201ENSMUST00000175818 335 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC7.99□□□□□ -1.13
Shmt1P50431 Gm37225-201ENSMUST00000193423 325 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC7.99□□□□□ -1.13
Shmt1P50431 Gm8190-201ENSMUST00000199603 586 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Gm43558-201ENSMUST00000200155 210 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Gm43812-202ENSMUST00000202701 581 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 4930425L21Rik-202ENSMUST00000205073 871 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Gm4796-201ENSMUST00000219802 624 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 AC152169.2-201ENSMUST00000224558 613 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 AC165260.4-201ENSMUST00000225924 724 ntBASIC7.99□□□□□ -1.13
Shmt1P50431 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Gm1604a-201ENSMUST00000097422 781 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Gm46123-201ENSMUST00000217447 6424 ntTSL 5 BASIC7.99□□□□□ -1.13
Shmt1P50431 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Snapc4-201ENSMUST00000035427 4363 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
Shmt1P50431 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Shmt1P50431 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC7.99□□□□□ -1.13
Shmt1P50431 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
Shmt1P50431 Uba7-201ENSMUST00000035216 3195 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 4930524O08Rik-201ENSMUST00000183387 1451 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
Shmt1P50431 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
Shmt1P50431 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 U2surp-209ENSMUST00000217176 3111 ntTSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 Dalir-201ENSMUST00000188773 2170 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Ctxn3-201ENSMUST00000091892 1441 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm37109-201ENSMUST00000195475 2254 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Slc17a3-202ENSMUST00000091698 1759 ntTSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 D630045J12Rik-201ENSMUST00000117556 10916 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm15054-201ENSMUST00000117393 281 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Gm11928-201ENSMUST00000119323 437 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm12484-201ENSMUST00000156311 581 ntTSL 5 BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm22206-201ENSMUST00000158612 116 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Gm24824-201ENSMUST00000175097 78 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 Gm5445-201ENSMUST00000180224 480 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm37720-201ENSMUST00000195497 1241 ntBASIC7.98□□□□□ -1.13
Shmt1P50431 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC7.98□□□□□ -1.13
Shmt1P50431 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
Shmt1P50431 Gm19092-201ENSMUST00000209036 969 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 109.3 ms