Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Cntn1-202ENSMUST00000068378 3964 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Gm38070-201ENSMUST00000191850 6480 ntBASIC6.11□□□□□ -1.43
VhlP40338 Dnah11-201ENSMUST00000084806 14072 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Gm23192-201ENSMUST00000102434 96 ntBASIC6.11□□□□□ -1.43
VhlP40338 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Gm13573-201ENSMUST00000116410 631 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Tpi-rs8-201ENSMUST00000120382 708 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm6292-201ENSMUST00000120712 1095 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm15220-201ENSMUST00000120730 379 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm12754-201ENSMUST00000121908 454 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm11632-201ENSMUST00000145489 674 ntTSL 3 BASIC6.11□□□□□ -1.43
VhlP40338 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Tdgf1-ps1-201ENSMUST00000179882 516 ntBASIC6.11□□□□□ -1.43
VhlP40338 Mir6403-201ENSMUST00000185007 129 ntBASIC6.11□□□□□ -1.43
VhlP40338 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Gm29175-201ENSMUST00000189500 402 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm37689-201ENSMUST00000193139 275 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm8010-201ENSMUST00000194128 873 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC6.11□□□□□ -1.43
VhlP40338 Fxyd4-208ENSMUST00000204950 586 ntTSL 3 BASIC6.11□□□□□ -1.43
VhlP40338 Gm45155-201ENSMUST00000207365 596 ntTSL 2 BASIC6.11□□□□□ -1.43
VhlP40338 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC6.11□□□□□ -1.43
VhlP40338 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC6.11□□□□□ -1.43
VhlP40338 AC099629.1-201ENSMUST00000226778 464 ntBASIC6.11□□□□□ -1.43
VhlP40338 AC166822.2-201ENSMUST00000228746 275 ntBASIC6.11□□□□□ -1.43
VhlP40338 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Rps7-201ENSMUST00000074267 954 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
VhlP40338 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 Olfr1055-201ENSMUST00000099894 1182 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 Nudcd1-206ENSMUST00000227843 5077 ntAPPRIS P2 BASIC6.11□□□□□ -1.43
VhlP40338 Gm43279-201ENSMUST00000202376 2512 ntBASIC6.11□□□□□ -1.43
VhlP40338 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Gm38120-201ENSMUST00000195506 4642 ntBASIC6.11□□□□□ -1.43
VhlP40338 1110002J07Rik-201ENSMUST00000181710 2229 ntTSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 AC156636.1-201ENSMUST00000218639 2229 ntBASIC6.11□□□□□ -1.43
VhlP40338 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Saa4-201ENSMUST00000006952 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.11□□□□□ -1.43
VhlP40338 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.11□□□□□ -1.43
VhlP40338 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 AC139758.3-201ENSMUST00000226853 2704 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm44021-201ENSMUST00000203055 3516 ntBASIC6.11□□□□□ -1.43
VhlP40338 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
VhlP40338 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC6.11□□□□□ -1.43
VhlP40338 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Nipsnap3a-202ENSMUST00000107666 1553 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Macrod2os1-201ENSMUST00000151538 3131 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 AC162181.1-201ENSMUST00000221643 3728 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.1□□□□□ -1.43
VhlP40338 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Olfr1278-203ENSMUST00000213727 6744 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Gm44509-201ENSMUST00000205400 1324 ntBASIC6.1□□□□□ -1.43
VhlP40338 AC125487.2-201ENSMUST00000219810 1300 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm21036-201ENSMUST00000207544 2611 ntBASIC6.1□□□□□ -1.43
VhlP40338 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Gm16409-201ENSMUST00000100510 747 ntBASIC6.1□□□□□ -1.43
VhlP40338 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.1□□□□□ -1.43
VhlP40338 Lypd8-202ENSMUST00000108826 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Gm11207-201ENSMUST00000117824 414 ntBASIC6.1□□□□□ -1.43
VhlP40338 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm9143-201ENSMUST00000120745 745 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm8172-201ENSMUST00000120762 750 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC6.1□□□□□ -1.43
VhlP40338 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
VhlP40338 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Gm22224-201ENSMUST00000157357 93 ntBASIC6.1□□□□□ -1.43
VhlP40338 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Mir7115-201ENSMUST00000184275 64 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Gm37108-201ENSMUST00000194605 626 ntBASIC6.1□□□□□ -1.43
VhlP40338 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC6.1□□□□□ -1.43
VhlP40338 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC6.1□□□□□ -1.43
VhlP40338 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 AC158518.1-201ENSMUST00000216435 320 ntTSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 AC118249.1-201ENSMUST00000224822 608 ntBASIC6.1□□□□□ -1.43
VhlP40338 AC163038.4-201ENSMUST00000224942 474 ntBASIC6.1□□□□□ -1.43
VhlP40338 AC154760.1-201ENSMUST00000227218 673 ntBASIC6.1□□□□□ -1.43
VhlP40338 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
VhlP40338 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC6.1□□□□□ -1.43
VhlP40338 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.1□□□□□ -1.43
VhlP40338 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms