Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm44834-201ENSMUST00000206671 1396 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm16409-201ENSMUST00000100510 747 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm25761-201ENSMUST00000103983 128 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm14056-201ENSMUST00000117198 642 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm12310-201ENSMUST00000118013 492 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm15047-201ENSMUST00000118891 454 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm12599-201ENSMUST00000120534 792 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm11259-201ENSMUST00000120554 715 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm9143-201ENSMUST00000120745 745 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm8172-201ENSMUST00000120762 750 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm11695-201ENSMUST00000144230 407 ntTSL 2 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm22562-201ENSMUST00000157334 111 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm7876-201ENSMUST00000169465 984 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm3043-201ENSMUST00000170639 821 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Oas1h-202ENSMUST00000171820 931 ntTSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm24083-201ENSMUST00000175174 120 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Gm19791-201ENSMUST00000180398 859 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Tmem147os-201ENSMUST00000180820 1276 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Mir7029-201ENSMUST00000184777 61 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Gm29462-201ENSMUST00000191458 288 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm19035-202ENSMUST00000194575 959 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Csn2-204ENSMUST00000196869 879 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm19088-201ENSMUST00000198800 566 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm6590-201ENSMUST00000203343 687 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm44849-201ENSMUST00000207595 484 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm19269-201ENSMUST00000211401 804 ntBASIC8.03□□□□□ -1.12
Usp4P35123 AC121804.1-201ENSMUST00000221016 394 ntBASIC8.03□□□□□ -1.12
Usp4P35123 AC163651.1-201ENSMUST00000222500 372 ntBASIC8.03□□□□□ -1.12
Usp4P35123 AC146596.1-201ENSMUST00000223507 223 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC8.03□□□□□ -1.12
Usp4P35123 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Epha4-201ENSMUST00000027451 6328 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Ptprg-202ENSMUST00000119888 2787 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC8.03□□□□□ -1.12
Usp4P35123 Gm38244-201ENSMUST00000191737 2586 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Gm44014-201ENSMUST00000205150 1509 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.03□□□□□ -1.12
Usp4P35123 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 Gm20541-201ENSMUST00000173035 1406 ntBASIC8.03□□□□□ -1.12
Usp4P35123 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Usp4P35123 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Usp4P35123 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Usp4P35123 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC8.02□□□□□ -1.12
Usp4P35123 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Usp4P35123 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Usp4P35123 Gm43792-201ENSMUST00000202492 2210 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm28444-201ENSMUST00000190777 2137 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp4P35123 Gm28651-202ENSMUST00000227968 2693 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Olfr859-203ENSMUST00000217280 9596 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Usp4P35123 Mir688-201ENSMUST00000102055 75 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm25762-201ENSMUST00000103984 132 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm11922-201ENSMUST00000118967 475 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm6798-201ENSMUST00000119961 360 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm15006-201ENSMUST00000121419 1122 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp4P35123 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp4P35123 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC8.02□□□□□ -1.13
Usp4P35123 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Gm24111-201ENSMUST00000175491 97 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC8.02□□□□□ -1.13
Usp4P35123 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 1700003H04Rik-206ENSMUST00000180162 1086 ntAPPRIS P5 TSL 5 BASIC8.02□□□□□ -1.13
Usp4P35123 Snhg7-201ENSMUST00000181621 139 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm6931-201ENSMUST00000183103 371 ntBASIC8.02□□□□□ -1.13
Usp4P35123 BC065403-202ENSMUST00000184796 1043 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp4P35123 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp4P35123 Gm17835-201ENSMUST00000196870 499 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm17660-203ENSMUST00000198485 522 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Gm9497-201ENSMUST00000199908 538 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Dcp2-202ENSMUST00000202306 398 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Usp4P35123 Gm44285-201ENSMUST00000203557 940 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm45078-201ENSMUST00000205343 546 ntBASIC8.02□□□□□ -1.13
Usp4P35123 Gm3774-201ENSMUST00000209773 435 ntBASIC8.02□□□□□ -1.13
Usp4P35123 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC8.02□□□□□ -1.13
Usp4P35123 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms