Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Amy2b-201ENSMUST00000120184 1577 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm44677-201ENSMUST00000209151 3739 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Zscan18-201ENSMUST00000046245 3626 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Pik3ca-202ENSMUST00000108242 6171 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm44769-201ENSMUST00000206120 2809 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Zim1-201ENSMUST00000002336 7693 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm22760-201ENSMUST00000102277 93 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Rgs8-204ENSMUST00000111814 678 ntTSL 3 BASIC5.97□□□□□ -1.45
Sdc1P18828 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm13229-201ENSMUST00000118238 340 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm12710-201ENSMUST00000119011 216 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm12948-201ENSMUST00000119406 682 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm15702-201ENSMUST00000119680 444 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm15158-201ENSMUST00000120577 570 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Olfr1017-ps1-201ENSMUST00000121263 664 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm22202-201ENSMUST00000158608 311 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm16541-201ENSMUST00000160992 614 ntTSL 3 BASIC5.97□□□□□ -1.45
Sdc1P18828 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Baat-202ENSMUST00000166036 1263 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Sdc1P18828 Spc25-209ENSMUST00000167875 1194 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm20447-201ENSMUST00000173290 599 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Mir3091-201ENSMUST00000175086 76 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm10182-201ENSMUST00000178676 273 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm6216-201ENSMUST00000182390 687 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 1700009C05Rik-201ENSMUST00000191101 788 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm38078-201ENSMUST00000192771 392 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Iglc3-201ENSMUST00000200235 452 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm6072-201ENSMUST00000203989 496 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC5.97□□□□□ -1.45
Sdc1P18828 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 AC124465.1-201ENSMUST00000222349 746 ntTSL 3 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sdc1P18828 AC170810.2-201ENSMUST00000228384 1232 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Scgb1c1-201ENSMUST00000035300 455 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
Sdc1P18828 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm6505-201ENSMUST00000094335 648 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm42940-201ENSMUST00000200361 2362 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Gm44620-201ENSMUST00000209183 2887 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm13102-202ENSMUST00000097800 2293 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Gm9256-201ENSMUST00000198106 1420 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Olfr1500-205ENSMUST00000216287 2178 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Usp17la-201ENSMUST00000067695 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC5.97□□□□□ -1.45
Sdc1P18828 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sdc1P18828 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC5.97□□□□□ -1.45
Sdc1P18828 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sdc1P18828 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Sdc1P18828 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
Sdc1P18828 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
Sdc1P18828 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.96□□□□□ -1.45
Sdc1P18828 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
Sdc1P18828 Gm37945-201ENSMUST00000192536 4367 ntBASIC5.96□□□□□ -1.45
Sdc1P18828 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC5.96□□□□□ -1.45
Sdc1P18828 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Sdc1P18828 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm23604-201ENSMUST00000104311 132 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Gm14036-201ENSMUST00000118248 480 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Gm5909-201ENSMUST00000119768 1281 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Gm15007-201ENSMUST00000119982 710 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Gm13161-201ENSMUST00000120609 559 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Rpl5-ps1-201ENSMUST00000121367 894 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 1700003M07Rik-201ENSMUST00000139884 541 ntTSL 2 BASIC5.96□□□□□ -1.46
Sdc1P18828 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC5.96□□□□□ -1.46
Sdc1P18828 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sdc1P18828 Gm23827-201ENSMUST00000157116 145 ntBASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms