Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm24826-202ENSMUST00000197298 216 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Gm2975-201ENSMUST00000209710 820 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Gm22581-201ENSMUST00000083735 136 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm8822-201ENSMUST00000118948 2347 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Nckap5-208ENSMUST00000161954 7090 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col1a1P11087 Serpinb1b-201ENSMUST00000016951 1696 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm28906-201ENSMUST00000191371 1779 ntBASIC8.71□□□□□ -1.01
Col1a1P11087 Gsdmc4-202ENSMUST00000188108 2085 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
Col1a1P11087 Gm33280-201ENSMUST00000193983 4340 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Qrich2-204ENSMUST00000208602 7260 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
Col1a1P11087 Mgat4a-201ENSMUST00000042161 7030 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Olfr319-203ENSMUST00000215962 2500 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
Col1a1P11087 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Anln-201ENSMUST00000040912 4605 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Sorbs1-212ENSMUST00000225148 2379 ntAPPRIS ALT2 BASIC8.71□□□□□ -1.02
Col1a1P11087 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
Col1a1P11087 Gm39321-203ENSMUST00000217090 1575 ntTSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29398-201ENSMUST00000186355 1491 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm14976-201ENSMUST00000117055 1394 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC8.7□□□□□ -1.02
Col1a1P11087 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
Col1a1P11087 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm24545-201ENSMUST00000158651 85 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm3760-201ENSMUST00000167475 804 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29048-201ENSMUST00000185342 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29403-201ENSMUST00000185491 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28234-201ENSMUST00000185657 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28248-201ENSMUST00000186093 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29633-202ENSMUST00000186217 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28829-201ENSMUST00000186231 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28261-201ENSMUST00000186417 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28983-201ENSMUST00000186685 614 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28815-201ENSMUST00000186751 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28608-201ENSMUST00000186860 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28122-201ENSMUST00000187088 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28150-201ENSMUST00000187305 614 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28420-201ENSMUST00000187340 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28106-201ENSMUST00000187640 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28698-201ENSMUST00000187734 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29224-201ENSMUST00000187965 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29189-201ENSMUST00000188018 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29476-201ENSMUST00000188397 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29505-201ENSMUST00000188424 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28125-201ENSMUST00000188470 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29391-201ENSMUST00000188545 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29280-201ENSMUST00000188571 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28349-201ENSMUST00000188590 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29652-201ENSMUST00000188622 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28819-206ENSMUST00000188816 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29079-201ENSMUST00000188875 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28213-201ENSMUST00000189183 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29382-201ENSMUST00000189549 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29377-205ENSMUST00000189603 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28327-201ENSMUST00000189638 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28790-201ENSMUST00000189642 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28907-201ENSMUST00000189700 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29586-207ENSMUST00000189745 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29115-201ENSMUST00000189870 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28366-201ENSMUST00000190147 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29212-201ENSMUST00000190384 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29533-201ENSMUST00000190403 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28162-201ENSMUST00000190545 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29030-201ENSMUST00000190848 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28742-201ENSMUST00000191001 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28899-201ENSMUST00000191161 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29567-201ENSMUST00000191188 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28222-201ENSMUST00000191210 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28776-201ENSMUST00000191282 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29306-201ENSMUST00000191366 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29618-201ENSMUST00000191423 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28136-210ENSMUST00000191432 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm29251-201ENSMUST00000191480 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm28658-201ENSMUST00000191532 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm32180-201ENSMUST00000192415 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm30598-201ENSMUST00000192620 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm37627-201ENSMUST00000194585 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm34274-201ENSMUST00000195825 615 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC8.7□□□□□ -1.02
Col1a1P11087 Gm45497-201ENSMUST00000211701 740 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Gm32105-201ENSMUST00000218512 511 ntTSL 5 BASIC8.7□□□□□ -1.02
Col1a1P11087 AC164424.3-201ENSMUST00000220809 148 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Col1a1P11087 AC166358.8-201ENSMUST00000223288 105 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 AC124739.1-201ENSMUST00000223433 148 ntBASIC8.7□□□□□ -1.02
Col1a1P11087 Hbb-bh1-201ENSMUST00000063957 613 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms