Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm13915-201ENSMUST00000119314 931 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm22847-201ENSMUST00000157707 105 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Traj54-201ENSMUST00000165071 54 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm15251-201ENSMUST00000177947 883 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm27177-204ENSMUST00000184491 602 ntTSL 3 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Txn-ps1-201ENSMUST00000186385 309 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm5920-201ENSMUST00000187390 853 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm5251-201ENSMUST00000188959 472 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm42558-201ENSMUST00000200982 265 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm42965-201ENSMUST00000201254 250 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Vmn1r41-204ENSMUST00000227039 985 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Olfr448-201ENSMUST00000058668 933 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm20302-201ENSMUST00000080671 275 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm24046-201ENSMUST00000083111 165 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Timp1-201ENSMUST00000009530 833 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm5841-201ENSMUST00000195307 2177 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 E430024I08Rik-202ENSMUST00000220632 1513 ntTSL 5 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm18305-201ENSMUST00000216532 2128 ntBASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Olfr531-204ENSMUST00000217167 3874 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Gm8005-201ENSMUST00000167326 1401 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
Trim3Q9R1R2 CT010453.1-201ENSMUST00000226795 2201 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Cxcr2-202ENSMUST00000106899 3046 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm43158-201ENSMUST00000198484 1555 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Kat6a-201ENSMUST00000044331 9113 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Elavl2-206ENSMUST00000107116 1282 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm7803-201ENSMUST00000117176 1015 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm13742-201ENSMUST00000118805 457 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm14450-201ENSMUST00000119984 240 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Defa-ps10-201ENSMUST00000121649 171 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm16407-201ENSMUST00000122134 567 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm25780-201ENSMUST00000122528 253 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm21293-201ENSMUST00000170919 864 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Mir7029-201ENSMUST00000184777 61 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 C430002N11Rik-204ENSMUST00000190054 443 ntTSL 3 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm5575-201ENSMUST00000190879 398 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm38078-201ENSMUST00000192771 392 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 2610034O05Rik-201ENSMUST00000194078 855 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm9497-201ENSMUST00000199908 538 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Olfr1348-204ENSMUST00000208066 1135 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm7441-201ENSMUST00000220697 1074 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm6807-201ENSMUST00000077435 888 ntBASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Olfr1247-201ENSMUST00000099771 945 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Hps5-203ENSMUST00000107654 4422 ntAPPRIS P3 TSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Il15ra-214ENSMUST00000138349 1936 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Ate1-208ENSMUST00000216011 1680 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
Trim3Q9R1R2 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim3Q9R1R2 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim3Q9R1R2 Gm37372-201ENSMUST00000193577 3311 ntBASIC7.09□□□□□ -1.28
Trim3Q9R1R2 Osbpl3-202ENSMUST00000090019 4039 ntAPPRIS ALT1 TSL 5 BASIC7.09□□□□□ -1.28
Trim3Q9R1R2 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim3Q9R1R2 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.28
Trim3Q9R1R2 Kbtbd3-202ENSMUST00000212221 2313 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim3Q9R1R2 Il1f9-201ENSMUST00000057567 1648 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.28
Trim3Q9R1R2 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 4930402H24Rik-201ENSMUST00000044766 6628 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm6823-201ENSMUST00000120791 1839 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Gm44777-201ENSMUST00000205941 4052 ntBASIC7.08□□□□□ -1.28
Trim3Q9R1R2 Tpp1-201ENSMUST00000033184 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms