Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm43343-201ENSMUST00000202454 1926 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Gm6554-201ENSMUST00000220592 1912 ntBASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC7.82□□□□□ -1.16
Trim39Q9ESN2 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm11977-201ENSMUST00000118511 1461 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Slc30a6-201ENSMUST00000024870 2156 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm9165-201ENSMUST00000208467 2044 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Vmn2r52-201ENSMUST00000164918 2559 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gata4-203ENSMUST00000121312 2407 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 C6-201ENSMUST00000022788 2447 ntAPPRIS P2 TSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Ralgps2-201ENSMUST00000027886 4237 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm26744-201ENSMUST00000181834 1731 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gpr55-201ENSMUST00000086975 3721 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Frrs1-202ENSMUST00000195905 6823 ntAPPRIS P1 TSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 AC101875.1-201ENSMUST00000222666 2223 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm15834-202ENSMUST00000139825 2613 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 L3mbtl3-203ENSMUST00000174766 3411 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Snord65-201ENSMUST00000104269 72 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm23266-201ENSMUST00000104444 134 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm14837-201ENSMUST00000119688 206 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm12312-201ENSMUST00000120351 644 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm11370-201ENSMUST00000120583 260 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm11797-201ENSMUST00000121336 754 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm15410-201ENSMUST00000127763 544 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm14437-201ENSMUST00000152284 360 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Sumo2-207ENSMUST00000153892 1051 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm23082-201ENSMUST00000157852 133 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm23899-201ENSMUST00000158112 90 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm24393-201ENSMUST00000158135 97 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm24002-201ENSMUST00000158456 104 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm24773-201ENSMUST00000158513 99 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Atxn3-204ENSMUST00000160251 998 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 U2af1l4-204ENSMUST00000163464 651 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 H2-M10.4-202ENSMUST00000169950 996 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Mir5135-201ENSMUST00000174997 79 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm22461-201ENSMUST00000175272 70 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm35106-201ENSMUST00000192731 250 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm8704-201ENSMUST00000197181 435 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm8891-201ENSMUST00000198546 832 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm3922-201ENSMUST00000200519 435 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm18840-201ENSMUST00000204553 506 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm45227-201ENSMUST00000205585 169 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 B230311B06Rik-202ENSMUST00000207610 687 ntTSL 3 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Prmt1-214ENSMUST00000209124 741 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm10120-201ENSMUST00000219845 357 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Fkbp3-202ENSMUST00000220730 579 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 AC154250.1-201ENSMUST00000224775 489 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 AC154724.1-201ENSMUST00000225782 821 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 AC157772.1-201ENSMUST00000226266 365 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm17541-201ENSMUST00000080062 525 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Defb23-201ENSMUST00000099206 624 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Crbn-201ENSMUST00000013882 2072 ntAPPRIS ALT1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Slc6a19-201ENSMUST00000022048 3936 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Psg19-203ENSMUST00000182853 1518 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 AC125409.2-201ENSMUST00000221888 2158 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Tmem35b-202ENSMUST00000106097 1762 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Pax3-202ENSMUST00000087086 3863 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Sdr16c5-201ENSMUST00000040925 1385 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm28112-201ENSMUST00000190898 1875 ntBASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Gm26633-201ENSMUST00000180546 3256 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 Kin-201ENSMUST00000042512 1472 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
Trim39Q9ESN2 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Scfd1-205ENSMUST00000219434 2749 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 BC018473-201ENSMUST00000132056 1331 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm42519-201ENSMUST00000199282 3656 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm44257-201ENSMUST00000204469 1446 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Synpo2-201ENSMUST00000051443 3719 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Cd300ld-201ENSMUST00000045075 2645 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 A530040E14Rik-201ENSMUST00000093501 1515 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm6913-201ENSMUST00000100019 348 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Rab3b-203ENSMUST00000106651 1078 ntTSL 5 BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Dab1-201ENSMUST00000106826 996 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Sult2a1-201ENSMUST00000108522 1020 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm23368-201ENSMUST00000116939 96 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm14509-201ENSMUST00000117312 1286 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm14994-201ENSMUST00000117482 1092 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm12003-201ENSMUST00000118518 1105 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm13198-201ENSMUST00000119322 826 ntBASIC7.8□□□□□ -1.16
Trim39Q9ESN2 Gm11461-201ENSMUST00000119909 387 ntBASIC7.8□□□□□ -1.16
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms