Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm20638-201ENSMUST00000175796 550 ntTSL 5 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 I830127L07Rik-201ENSMUST00000187250 730 ntTSL 5 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm18351-201ENSMUST00000188646 883 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm29126-201ENSMUST00000188686 151 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm5723-201ENSMUST00000203096 432 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm30196-201ENSMUST00000208957 160 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 4930555F03Rik-205ENSMUST00000212179 1257 ntTSL 5 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 4930471E19Rik-202ENSMUST00000219150 737 ntTSL 3 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Olfr328-201ENSMUST00000073933 933 ntAPPRIS P1 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Vpreb2-201ENSMUST00000075371 429 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm7493-201ENSMUST00000085919 626 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm44186-201ENSMUST00000204118 2752 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Evi5-201ENSMUST00000112642 5849 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Avpr1b-201ENSMUST00000027690 4023 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
Lrif1Q8CDD9 Ica1l-206ENSMUST00000191251 3415 ntAPPRIS P2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Stard9-201ENSMUST00000070420 4874 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Igf1os-202ENSMUST00000146581 2595 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm3139-201ENSMUST00000178330 1446 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm3183-201ENSMUST00000180076 1446 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Lrrc63-201ENSMUST00000022574 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Phf7-206ENSMUST00000228437 1373 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm8836-201ENSMUST00000198196 1348 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Ccdc163-203ENSMUST00000106463 1159 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm13407-201ENSMUST00000118256 360 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm16418-201ENSMUST00000118577 171 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm12599-201ENSMUST00000120534 792 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm14826-201ENSMUST00000121284 901 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 1700060C16Rik-201ENSMUST00000150559 645 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 B430010I23Rik-202ENSMUST00000152188 1168 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Mir1962-201ENSMUST00000157516 121 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm8004-201ENSMUST00000187782 617 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 AC111092.1-201ENSMUST00000220181 411 ntTSL 3 BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Tmem225-201ENSMUST00000046333 993 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 4930433N12Rik-201ENSMUST00000048921 1204 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm5316-201ENSMUST00000050391 270 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm22865-201ENSMUST00000083949 214 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm5702-201ENSMUST00000185629 2469 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm37151-201ENSMUST00000194631 5007 ntBASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Ncoa6-202ENSMUST00000109669 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
Lrif1Q8CDD9 Gm1698-201ENSMUST00000136749 2313 ntTSL 2 BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Tcf20-201ENSMUST00000048966 7224 ntAPPRIS P3 TSL 1 (best) BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Cd247-209ENSMUST00000187313 2957 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Vmn2r-ps159-202ENSMUST00000096792 2574 ntBASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Mir683-2-201ENSMUST00000102099 109 ntBASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
Lrif1Q8CDD9 Gm26014-201ENSMUST00000104405 132 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms