Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 I830077J02Rik-201ENSMUST00000098758 2599 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Map2k7-204ENSMUST00000110995 1558 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm16559-201ENSMUST00000160080 1564 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Olfr524-202ENSMUST00000215815 5044 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 4933412E24Rik-201ENSMUST00000096421 1748 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Slc2a12-201ENSMUST00000042261 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Xpnpep2-202ENSMUST00000114998 3017 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Cxcl2-202ENSMUST00000200681 1859 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Cd99l2-203ENSMUST00000114586 3459 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Tdpoz1-202ENSMUST00000181541 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Scn3b-206ENSMUST00000176185 4090 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Sgpl1-201ENSMUST00000092498 4070 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm43750-201ENSMUST00000199027 2493 ntBASIC6.72□□□□□ -1.33
Foxc1Q61572 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Ctsc-203ENSMUST00000131108 3220 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Aldh3b3-202ENSMUST00000179433 3827 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gm26856-201ENSMUST00000181919 1349 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 9130230L23Rik-203ENSMUST00000201351 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
Foxc1Q61572 Slc36a1os-202ENSMUST00000157010 1790 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Htr2b-201ENSMUST00000027431 2083 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Otog-202ENSMUST00000209802 3558 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
Foxc1Q61572 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
Foxc1Q61572 Def8-204ENSMUST00000108830 3191 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Foxc1Q61572 Snap25-201ENSMUST00000028727 2116 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
Foxc1Q61572 Olfr452-202ENSMUST00000214465 1967 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Foxc1Q61572 Wdr20rt-203ENSMUST00000221980 1667 ntTSL 5 BASIC6.71□□□□□ -1.33
Foxc1Q61572 Trim40-203ENSMUST00000172711 1539 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Foxc1Q61572 Spx-204ENSMUST00000211094 1510 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
Foxc1Q61572 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC6.71□□□□□ -1.33
Foxc1Q61572 Gabrb2-201ENSMUST00000007797 3989 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.33
Foxc1Q61572 Gm40999-201ENSMUST00000222586 3387 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
Foxc1Q61572 Olfr214-203ENSMUST00000214699 2610 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Foxc1Q61572 Olfr214-204ENSMUST00000215846 2605 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
Foxc1Q61572 Gm44167-201ENSMUST00000204957 1878 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 AI182371-201ENSMUST00000045776 1724 ntAPPRIS P2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 AC154828.1-201ENSMUST00000220696 2810 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Ear-ps2-201ENSMUST00000100689 466 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Tfam-202ENSMUST00000105432 779 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm12353-201ENSMUST00000108250 554 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Eif5a-204ENSMUST00000108607 852 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm3244-201ENSMUST00000120938 390 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm9855-201ENSMUST00000121229 1194 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm13904-201ENSMUST00000121901 837 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm12551-201ENSMUST00000122073 726 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm12338-201ENSMUST00000122170 192 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm13767-201ENSMUST00000124074 876 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm15050-201ENSMUST00000133723 552 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 Hk1os-203ENSMUST00000143122 1218 ntTSL 2 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm11999-201ENSMUST00000145789 813 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm12257-201ENSMUST00000148244 585 ntTSL 3 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm23591-201ENSMUST00000157663 286 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm22434-201ENSMUST00000158549 122 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm6822-201ENSMUST00000161440 307 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm16118-201ENSMUST00000161914 680 ntTSL 2 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm15914-201ENSMUST00000161922 309 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Trav12d-3-201ENSMUST00000177703 347 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm7694-201ENSMUST00000179801 3827 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
Foxc1Q61572 4930500F10Rik-201ENSMUST00000180701 1224 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 1700034B16Rik-201ENSMUST00000180957 722 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm26993-201ENSMUST00000182766 789 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm7693-201ENSMUST00000183257 988 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 2410021H03Rik-201ENSMUST00000187090 764 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm29281-201ENSMUST00000188077 381 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm37353-201ENSMUST00000194497 313 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm44142-201ENSMUST00000203358 311 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm7384-201ENSMUST00000203682 530 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm44952-201ENSMUST00000204443 433 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm45100-201ENSMUST00000209153 391 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm2981-201ENSMUST00000213947 694 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Gm21041-201ENSMUST00000214829 823 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 AC140409.1-202ENSMUST00000216792 432 ntTSL 5 BASIC6.71□□□□□ -1.34
Foxc1Q61572 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Olfr809-203ENSMUST00000218237 1100 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Rpl19-ps2-201ENSMUST00000219540 590 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 AC159813.2-201ENSMUST00000221516 797 ntTSL 5 BASIC6.71□□□□□ -1.34
Foxc1Q61572 AC132247.1-201ENSMUST00000225930 585 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 CT030182.3-201ENSMUST00000225986 582 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 AC154589.1-201ENSMUST00000228694 604 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Cox8c-201ENSMUST00000053611 458 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
Foxc1Q61572 Olfr809-201ENSMUST00000059891 1100 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Foxc1Q61572 Rpl21-ps12-201ENSMUST00000080061 480 ntBASIC6.71□□□□□ -1.34
Foxc1Q61572 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms