Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm45478-201ENSMUST00000209472 211 ntBASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Gm36827-201ENSMUST00000220080 1249 ntTSL 5 BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Olfr743-201ENSMUST00000071294 936 ntAPPRIS P1 BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Pdzd2-201ENSMUST00000075317 10756 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Gm37382-201ENSMUST00000193032 1596 ntBASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Gm2654-201ENSMUST00000221381 1592 ntBASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Gm3234-201ENSMUST00000222644 5061 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 AC123705.1-201ENSMUST00000222512 2058 ntBASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Scn2b-201ENSMUST00000093855 3958 ntAPPRIS P1 TSL 2 BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.93□□□□□ -0.98
Vps54Q5SPW0 Szt2-201ENSMUST00000075406 10965 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Olfr775-202ENSMUST00000214109 3598 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Pfkfb1-201ENSMUST00000080884 1739 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 CR974429.2-201ENSMUST00000221883 1696 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Dusp18-201ENSMUST00000055931 4632 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Obox6-201ENSMUST00000108513 1344 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm26016-201ENSMUST00000104403 129 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm11926-201ENSMUST00000118520 430 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm6428-201ENSMUST00000161062 345 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm8046-201ENSMUST00000172151 616 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm4308-201ENSMUST00000179735 914 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm27373-201ENSMUST00000184017 184 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm18501-201ENSMUST00000185363 664 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm8004-201ENSMUST00000187782 617 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm8921-201ENSMUST00000204306 649 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 1810049I09Rik-201ENSMUST00000205499 453 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Olfr706-201ENSMUST00000209025 1087 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gnb1-ps3-201ENSMUST00000212191 950 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm8804-201ENSMUST00000212292 798 ntBASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Gm15759-201ENSMUST00000161126 3723 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Epb41-201ENSMUST00000030739 6565 ntAPPRIS P3 TSL 5 BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC8.92□□□□□ -0.98
Vps54Q5SPW0 Mre11a-202ENSMUST00000115632 5660 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Frmd4b-204ENSMUST00000113359 4311 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Zfp930-204ENSMUST00000212681 3001 ntAPPRIS P1 TSL 2 BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Synj2-206ENSMUST00000115787 4013 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Serpina3a-202ENSMUST00000109965 1204 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Ggact-202ENSMUST00000110679 686 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm14891-201ENSMUST00000117378 596 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm12459-201ENSMUST00000120659 356 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm12371-201ENSMUST00000144029 1091 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm6472-202ENSMUST00000187973 582 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm36928-201ENSMUST00000192466 694 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm37325-201ENSMUST00000194971 694 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Gm38430-201ENSMUST00000209888 1240 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 CT025639.2-201ENSMUST00000224440 1220 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 AV026068-229ENSMUST00000225516 595 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 AC122309.1-201ENSMUST00000226945 421 ntBASIC8.91□□□□□ -0.98
Vps54Q5SPW0 5530400C23Rik-201ENSMUST00000048459 649 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Hipk3-203ENSMUST00000111125 3651 ntTSL 5 BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.91□□□□□ -0.98
Vps54Q5SPW0 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Chrm2-202ENSMUST00000172278 5676 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Ganc-205ENSMUST00000135074 4780 ntAPPRIS P1 TSL 2 BASIC8.9□□□□□ -0.98
Vps54Q5SPW0 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.9□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 97.8 ms