Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Calcr-201ENSMUST00000075644 3763 ntAPPRIS P4 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Pik3cg-205ENSMUST00000217915 3340 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Pcdh15-228ENSMUST00000152819 2867 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Ptpro-202ENSMUST00000167002 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Synpo2-201ENSMUST00000051443 3719 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 CT009711.1-201ENSMUST00000223992 3040 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Hnf4g-201ENSMUST00000108393 2224 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm5228-201ENSMUST00000117186 357 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm8550-201ENSMUST00000161621 653 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 Dnah7c-201ENSMUST00000178395 612 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm33037-201ENSMUST00000217927 642 ntTSL 3 BASIC9.54□□□□□ -0.88
Smarcc1P97496 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC9.54□□□□□ -0.88
Smarcc1P97496 AC124103.1-201ENSMUST00000227564 1027 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm7265-201ENSMUST00000192735 3502 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 Fam160a2-208ENSMUST00000179474 10853 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Dock9-201ENSMUST00000040700 7803 ntAPPRIS P3 TSL 2 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm7534-201ENSMUST00000097849 2338 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Smarcc1P97496 Gm37382-201ENSMUST00000193032 1596 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC9.54□□□□□ -0.88
Smarcc1P97496 Ogdhl-203ENSMUST00000228529 3723 ntAPPRIS ALT2 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Smarcc1P97496 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Retreg1-203ENSMUST00000226438 2783 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Smarcc1P97496 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Zfp90-205ENSMUST00000212874 2195 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm12695-201ENSMUST00000107071 1904 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm37536-201ENSMUST00000194710 2491 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm17170-201ENSMUST00000112785 316 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm15007-201ENSMUST00000119982 710 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm13495-201ENSMUST00000121156 537 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC9.53□□□□□ -0.88
Smarcc1P97496 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Bud31-201ENSMUST00000159018 741 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm18595-201ENSMUST00000175736 1068 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm45478-201ENSMUST00000209472 211 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 CT010453.1-201ENSMUST00000226795 2201 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 BC106179-201ENSMUST00000055369 4128 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm37159-201ENSMUST00000192720 3605 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Trim21-202ENSMUST00000106913 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm44883-201ENSMUST00000206063 3258 ntBASIC9.53□□□□□ -0.88
Smarcc1P97496 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Wfdc5-201ENSMUST00000045127 2322 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Smarcc1P97496 Spen-201ENSMUST00000078886 12082 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Smarcc1P97496 Ppp1r3b-202ENSMUST00000210337 4349 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.88
Smarcc1P97496 Smco3-203ENSMUST00000203468 1791 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smarcc1P97496 Mcf2l-208ENSMUST00000110879 3664 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Smarcc1P97496 Pak7-202ENSMUST00000077200 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Smarcc1P97496 Gm884-202ENSMUST00000167262 4576 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Smarcc1P97496 Gm43589-201ENSMUST00000199400 1523 ntBASIC9.52□□□□□ -0.88
Smarcc1P97496 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Eif4g2-213ENSMUST00000162415 7995 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.52□□□□□ -0.89
Smarcc1P97496 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC9.52□□□□□ -0.89
Smarcc1P97496 Gm13486-201ENSMUST00000119910 282 ntBASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 88.4 ms