Protein–RNA interactions for Protein: P55194

Sh3bp1, SH3 domain-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3bp1P55194 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm7031-201ENSMUST00000173709 919 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm8974-201ENSMUST00000175770 479 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm5839-201ENSMUST00000182835 1007 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm29739-201ENSMUST00000191760 529 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm17835-201ENSMUST00000196870 499 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm42489-201ENSMUST00000198964 669 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm7478-201ENSMUST00000201054 581 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Speer9-ps1-201ENSMUST00000203447 775 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm44285-201ENSMUST00000203557 940 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm44721-201ENSMUST00000206978 472 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm3011-201ENSMUST00000215669 582 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Trim40-201ENSMUST00000087158 2117 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Mir484-201ENSMUST00000093566 67 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Sptan1-202ENSMUST00000095083 7883 ntTSL 5 BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Paics-202ENSMUST00000117536 1862 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm5605-201ENSMUST00000208940 1305 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm43161-201ENSMUST00000197020 1688 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm19031-201ENSMUST00000176280 1365 ntBASIC8.46□□□□□ -1.06
Sh3bp1P55194 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Rab7b-202ENSMUST00000064679 4498 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
Sh3bp1P55194 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 AC126028.1-201ENSMUST00000226218 2123 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Atp8b4-201ENSMUST00000040128 5693 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm37945-201ENSMUST00000192536 4367 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm23131-201ENSMUST00000104253 132 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Tmsb4x-203ENSMUST00000112176 698 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm12460-201ENSMUST00000117147 357 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm25320-201ENSMUST00000122551 324 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Aste1-204ENSMUST00000167674 1227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm24083-201ENSMUST00000175174 120 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm29000-202ENSMUST00000185562 571 ntTSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm28749-204ENSMUST00000187827 571 ntTSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm29178-207ENSMUST00000188496 1013 ntTSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm28844-206ENSMUST00000189297 815 ntTSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm43694-201ENSMUST00000200773 1119 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm42887-201ENSMUST00000202469 1119 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm18192-201ENSMUST00000210174 941 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 AC121542.2-201ENSMUST00000227529 400 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Tsga13-201ENSMUST00000048580 1141 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm10155-201ENSMUST00000084598 483 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Ipcef1-201ENSMUST00000078070 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 CT009480.1-201ENSMUST00000225771 4480 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm2098-201ENSMUST00000189146 1763 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
Sh3bp1P55194 Gm6819-201ENSMUST00000185325 1891 ntBASIC8.45□□□□□ -1.06
Sh3bp1P55194 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
Sh3bp1P55194 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Rapgef4-202ENSMUST00000090826 4181 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.44□□□□□ -1.06
Sh3bp1P55194 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
Sh3bp1P55194 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Mroh2b-201ENSMUST00000045736 4829 ntAPPRIS P1 TSL 5 BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Homer1-210ENSMUST00000109497 779 ntTSL 5 BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Homer1-211ENSMUST00000109498 815 ntTSL 5 BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.44□□□□□ -1.06
Sh3bp1P55194 Gm7831-201ENSMUST00000117990 552 ntBASIC8.44□□□□□ -1.06
Sh3bp1P55194 Gm14645-201ENSMUST00000118597 417 ntBASIC8.44□□□□□ -1.06
Sh3bp1P55194 Gm13466-201ENSMUST00000121515 999 ntBASIC8.44□□□□□ -1.06
Sh3bp1P55194 2410003L11Rik-202ENSMUST00000145262 642 ntTSL 3 BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC8.44□□□□□ -1.06
Sh3bp1P55194 Gm15866-202ENSMUST00000152116 914 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms