Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gm29008-201ENSMUST00000189387 298 ntBASIC9.52□□□□□ -0.88
Msh6P54276 Gm7412-201ENSMUST00000191692 605 ntBASIC9.52□□□□□ -0.88
Msh6P54276 Gm7285-201ENSMUST00000198801 580 ntBASIC9.52□□□□□ -0.88
Msh6P54276 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Msh6P54276 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC9.52□□□□□ -0.88
Msh6P54276 Olfr97-202ENSMUST00000207414 933 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Msh6P54276 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Msh6P54276 Gm45391-201ENSMUST00000211563 576 ntTSL 5 BASIC9.52□□□□□ -0.88
Msh6P54276 AC127224.1-201ENSMUST00000218094 453 ntBASIC9.52□□□□□ -0.88
Msh6P54276 AC151904.2-201ENSMUST00000218683 1177 ntBASIC9.52□□□□□ -0.88
Msh6P54276 AC164424.3-201ENSMUST00000220809 148 ntBASIC9.52□□□□□ -0.88
Msh6P54276 1700011B04Rik-205ENSMUST00000220995 831 ntTSL 5 BASIC9.52□□□□□ -0.88
Msh6P54276 AC166358.8-201ENSMUST00000223288 105 ntBASIC9.52□□□□□ -0.88
Msh6P54276 AC124739.1-201ENSMUST00000223433 148 ntBASIC9.52□□□□□ -0.88
Msh6P54276 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Msh6P54276 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Chn2-202ENSMUST00000067741 2983 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC9.52□□□□□ -0.89
Msh6P54276 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC9.52□□□□□ -0.89
Msh6P54276 Cdip1-201ENSMUST00000004173 3953 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Ppfibp2-201ENSMUST00000040056 3310 ntAPPRIS P3 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Gm3327-201ENSMUST00000168906 1389 ntAPPRIS P1 TSL 5 BASIC9.52□□□□□ -0.89
Msh6P54276 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.89
Msh6P54276 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Myo6-201ENSMUST00000035889 7871 ntTSL 5 BASIC9.52□□□□□ -0.89
Msh6P54276 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 Add1-201ENSMUST00000001108 3898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.52□□□□□ -0.89
Msh6P54276 AC123705.1-201ENSMUST00000222512 2058 ntBASIC9.52□□□□□ -0.89
Msh6P54276 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC9.51□□□□□ -0.89
Msh6P54276 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC9.51□□□□□ -0.89
Msh6P54276 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC9.51□□□□□ -0.89
Msh6P54276 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC9.51□□□□□ -0.89
Msh6P54276 Gm14503-201ENSMUST00000130337 1164 ntBASIC9.51□□□□□ -0.89
Msh6P54276 Gm14097-201ENSMUST00000147868 470 ntTSL 3 BASIC9.51□□□□□ -0.89
Msh6P54276 Phf11d-203ENSMUST00000161031 1130 ntAPPRIS ALT2 TSL 2 BASIC9.51□□□□□ -0.89
Msh6P54276 C78334-201ENSMUST00000186632 600 ntTSL 3 BASIC9.51□□□□□ -0.89
Msh6P54276 Gm38373-201ENSMUST00000192042 288 ntBASIC9.51□□□□□ -0.89
Msh6P54276 Gm4585-201ENSMUST00000207218 452 ntBASIC9.51□□□□□ -0.89
Msh6P54276 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 CT030166.4-201ENSMUST00000220640 404 ntBASIC9.51□□□□□ -0.89
Msh6P54276 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Msh6P54276 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
Msh6P54276 Syn3-201ENSMUST00000120638 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Gm28852-201ENSMUST00000186666 2160 ntTSL 5 BASIC9.51□□□□□ -0.89
Msh6P54276 Gm28880-201ENSMUST00000190161 2160 ntTSL 5 BASIC9.51□□□□□ -0.89
Msh6P54276 Khdc1a-201ENSMUST00000088407 1987 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Msh6P54276 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Tg-201ENSMUST00000065916 8454 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Adgrb3-205ENSMUST00000135518 5432 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Msh6P54276 Gm8180-201ENSMUST00000163599 1392 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Msh6P54276 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC9.51□□□□□ -0.89
Msh6P54276 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC9.51□□□□□ -0.89
Msh6P54276 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Lca5-201ENSMUST00000034791 4160 ntAPPRIS P4 TSL 1 (best) BASIC9.51□□□□□ -0.89
Msh6P54276 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Gm15007-201ENSMUST00000119982 710 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm14489-201ENSMUST00000120868 901 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm12477-201ENSMUST00000121221 571 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
Msh6P54276 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC9.5□□□□□ -0.89
Msh6P54276 Gm26784-201ENSMUST00000181666 410 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm17786-201ENSMUST00000182000 427 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Mir7084-201ENSMUST00000183876 70 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Mir6357-201ENSMUST00000184246 104 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm17965-201ENSMUST00000193904 517 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC9.5□□□□□ -0.89
Msh6P54276 Gm43033-201ENSMUST00000199682 425 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Ccl24-202ENSMUST00000201401 561 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Gm44613-201ENSMUST00000205637 877 ntTSL 5 BASIC9.5□□□□□ -0.89
Msh6P54276 Gm8168-201ENSMUST00000209631 948 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC9.5□□□□□ -0.89
Msh6P54276 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC9.5□□□□□ -0.89
Msh6P54276 AC154515.3-201ENSMUST00000225081 1159 ntBASIC9.5□□□□□ -0.89
Msh6P54276 CT030238.4-202ENSMUST00000226143 745 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Msh6P54276 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Msh6P54276 Olfr683-201ENSMUST00000061284 960 ntBASIC9.5□□□□□ -0.89
Msh6P54276 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Olfr557-201ENSMUST00000098218 1057 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
Msh6P54276 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
Msh6P54276 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms