Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm12939-201ENSMUST00000117303 165 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm14854-201ENSMUST00000117758 841 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm14356-201ENSMUST00000118322 869 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Rpl5-ps2-201ENSMUST00000119057 891 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm12890-201ENSMUST00000120885 373 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm13502-201ENSMUST00000121574 684 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm5843-201ENSMUST00000121631 476 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm23430-201ENSMUST00000122490 314 ntBASIC8.24□□□□□ -1.09
Sox1P53783 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 1700011I03Rik-204ENSMUST00000135806 831 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Mcpt2-201ENSMUST00000015576 1061 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm25837-201ENSMUST00000158919 108 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm16298-201ENSMUST00000161107 420 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Glipr1-204ENSMUST00000162508 1183 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Gm24157-201ENSMUST00000175265 111 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm15256-201ENSMUST00000177793 883 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Gm27350-201ENSMUST00000185109 98 ntBASIC8.24□□□□□ -1.09
Sox1P53783 1700030O20Rik-201ENSMUST00000185546 594 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Rpap3-ps1-201ENSMUST00000190928 454 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm43048-201ENSMUST00000196101 388 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm24826-202ENSMUST00000197298 216 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm35570-201ENSMUST00000198730 681 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Ighv1-83-201ENSMUST00000199643 351 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm42857-201ENSMUST00000200823 339 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm19254-201ENSMUST00000204828 294 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm45715-201ENSMUST00000206991 434 ntTSL 3 BASIC8.24□□□□□ -1.09
Sox1P53783 Gm44621-201ENSMUST00000207643 1166 ntTSL 3 BASIC8.24□□□□□ -1.09
Sox1P53783 Gm44785-202ENSMUST00000208294 932 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 AC131660.1-201ENSMUST00000215630 1062 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.24□□□□□ -1.09
Sox1P53783 1700042O05Rik-201ENSMUST00000219017 584 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 AC124397.1-201ENSMUST00000224296 653 ntBASIC8.24□□□□□ -1.09
Sox1P53783 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.24□□□□□ -1.09
Sox1P53783 AC163295.2-202ENSMUST00000227763 1053 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Vmn1r73-201ENSMUST00000055070 912 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Sox1P53783 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Sox1P53783 Vmn1r193-201ENSMUST00000057516 960 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Sox1P53783 Gm15500-201ENSMUST00000071523 894 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Olfr263-201ENSMUST00000096006 1087 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Sox1P53783 Vmn1r55-201ENSMUST00000098844 1284 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Sox1P53783 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Cntn4-205ENSMUST00000113261 2904 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm45767-201ENSMUST00000212778 4561 ntBASIC8.24□□□□□ -1.09
Sox1P53783 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Ick-202ENSMUST00000044551 6560 ntAPPRIS P2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC8.24□□□□□ -1.09
Sox1P53783 Stam-201ENSMUST00000028050 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 D630039A03Rik-201ENSMUST00000063816 2830 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 4933427D14Rik-202ENSMUST00000108506 4732 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm9521-201ENSMUST00000206656 1516 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Gm45025-201ENSMUST00000206043 2389 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Sox1P53783 Gm43910-201ENSMUST00000204561 3241 ntBASIC8.24□□□□□ -1.09
Sox1P53783 Myom1-202ENSMUST00000073211 5602 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Chrna5-201ENSMUST00000093844 1877 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Fam135b-201ENSMUST00000022953 4623 ntAPPRIS P1 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Scmh1-204ENSMUST00000106301 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Gm45289-201ENSMUST00000211048 2577 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Pvr-201ENSMUST00000043517 2905 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Itm2a-201ENSMUST00000033591 1744 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 AC160340.1-201ENSMUST00000222952 3964 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Tmem181b-ps-202ENSMUST00000180035 2426 ntTSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Lrit2-201ENSMUST00000057176 2790 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Cldn18-201ENSMUST00000035048 4172 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Dmxl2-201ENSMUST00000118163 10614 ntAPPRIS P2 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Cwc22-205ENSMUST00000111824 2603 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Gm2080-201ENSMUST00000211299 1573 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Golm1-202ENSMUST00000095739 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 1700001J11Rik-202ENSMUST00000190330 2463 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Gm45220-201ENSMUST00000207847 2509 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Olfr718-ps1-201ENSMUST00000164536 3962 ntAPPRIS P5 TSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Saal1-201ENSMUST00000143082 4728 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
Sox1P53783 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC8.23□□□□□ -1.09
Sox1P53783 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Gm13430-201ENSMUST00000121366 288 ntBASIC8.23□□□□□ -1.09
Sox1P53783 Gm12720-201ENSMUST00000123834 472 ntTSL 2 BASIC8.23□□□□□ -1.09
Sox1P53783 Gm14288-202ENSMUST00000123863 267 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
Sox1P53783 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC8.23□□□□□ -1.09
Sox1P53783 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
Sox1P53783 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC8.23□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms