Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm37077-201ENSMUST00000195723 3691 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm13038-201ENSMUST00000119886 459 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Gm11895-201ENSMUST00000122165 467 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm20655-201ENSMUST00000176132 473 ntTSL 3 BASIC8.01□□□□□ -1.13
Shmt1P50431 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm9556-201ENSMUST00000182938 940 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Mir6409-201ENSMUST00000184957 92 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Gm28573-201ENSMUST00000187821 380 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Gm28145-201ENSMUST00000189742 380 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Gm28164-201ENSMUST00000190143 442 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm28400-201ENSMUST00000191332 380 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Trbv27-201ENSMUST00000193711 277 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC8.01□□□□□ -1.13
Shmt1P50431 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 AC153522.1-201ENSMUST00000220047 1090 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Shmt1P50431 Vmn1r231-201ENSMUST00000061278 936 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Shmt1P50431 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Shmt1P50431 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm42973-201ENSMUST00000197913 3200 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Gm37570-201ENSMUST00000195411 3106 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Usp54-201ENSMUST00000022356 6580 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm43488-201ENSMUST00000198874 2504 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Rasef-202ENSMUST00000102837 5158 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm38288-201ENSMUST00000195330 1320 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.01□□□□□ -1.13
Shmt1P50431 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 9430034N14Rik-201ENSMUST00000193532 3785 ntBASIC8□□□□□ -1.13
Shmt1P50431 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Vma21-203ENSMUST00000114577 4652 ntTSL 3 BASIC8□□□□□ -1.13
Shmt1P50431 Gm26720-201ENSMUST00000181260 3538 ntTSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 Olfr324-203ENSMUST00000216965 3691 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 Zfp882-201ENSMUST00000110002 3152 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm37067-201ENSMUST00000195730 1628 ntBASIC8□□□□□ -1.13
Shmt1P50431 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 AC156025.3-201ENSMUST00000225919 3095 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm831-201ENSMUST00000149942 4517 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm44854-201ENSMUST00000205493 2340 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Tmem52b-201ENSMUST00000032263 2877 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Prps1l1-201ENSMUST00000134550 1676 ntAPPRIS P1 BASIC8□□□□□ -1.13
Shmt1P50431 Pex5l-211ENSMUST00000194016 4206 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm25593-201ENSMUST00000102272 96 ntBASIC8□□□□□ -1.13
Shmt1P50431 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm15665-201ENSMUST00000119116 847 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm13622-201ENSMUST00000120658 433 ntBASIC8□□□□□ -1.13
Shmt1P50431 Sh3d2c-ps1-201ENSMUST00000121498 904 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8□□□□□ -1.13
Shmt1P50431 Gm9697-201ENSMUST00000147052 997 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm22035-201ENSMUST00000157284 228 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm23673-201ENSMUST00000157474 298 ntBASIC8□□□□□ -1.13
Shmt1P50431 Mir1983-201ENSMUST00000157523 132 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm24782-201ENSMUST00000157641 132 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm22764-201ENSMUST00000158370 92 ntBASIC8□□□□□ -1.13
Shmt1P50431 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm9286-201ENSMUST00000173586 508 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm6489-201ENSMUST00000178167 696 ntBASIC8□□□□□ -1.13
Shmt1P50431 Obox1-206ENSMUST00000181001 1217 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 B230104I21Rik-201ENSMUST00000181143 876 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 Gm28512-201ENSMUST00000187415 762 ntTSL 3 BASIC8□□□□□ -1.13
Shmt1P50431 Hcfc1r1-ps1-201ENSMUST00000198911 346 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm18660-201ENSMUST00000199542 629 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm4605-201ENSMUST00000203148 625 ntBASIC8□□□□□ -1.13
Shmt1P50431 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC8□□□□□ -1.13
Shmt1P50431 Gm8921-201ENSMUST00000204306 649 ntBASIC8□□□□□ -1.13
Shmt1P50431 Gm31045-201ENSMUST00000211266 922 ntTSL 5 BASIC8□□□□□ -1.13
Shmt1P50431 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8□□□□□ -1.13
Shmt1P50431 AC192091.1-201ENSMUST00000218668 439 ntBASIC8□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms