Protein–RNA interactions for Protein: P50284

Ltbr, Tumor necrosis factor receptor superfamily member 3, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LtbrP50284 Bcl2l11-202ENSMUST00000089634 2301 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LtbrP50284 Gm2a-201ENSMUST00000000608 4127 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LtbrP50284 Gm6327-201ENSMUST00000171185 1335 ntBASIC10.02□□□□□ -0.81
LtbrP50284 Cast-201ENSMUST00000065629 2910 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
LtbrP50284 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
LtbrP50284 Etfdh-202ENSMUST00000120992 2233 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LtbrP50284 Gm8464-201ENSMUST00000140208 2200 ntBASIC10.02□□□□□ -0.81
LtbrP50284 Gm4750-202ENSMUST00000152262 2200 ntBASIC10.02□□□□□ -0.81
LtbrP50284 Gm11690-201ENSMUST00000128183 1856 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LtbrP50284 Gm10538-201ENSMUST00000189499 1877 ntTSL 2 BASIC10.02□□□□□ -0.81
LtbrP50284 A530040E14Rik-201ENSMUST00000093501 1515 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
LtbrP50284 Gm42895-201ENSMUST00000200761 2996 ntBASIC10.02□□□□□ -0.81
LtbrP50284 Tyms-201ENSMUST00000026846 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LtbrP50284 Gsap-201ENSMUST00000036031 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
LtbrP50284 Gm38236-201ENSMUST00000192661 3229 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Acbd5-201ENSMUST00000028121 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 A330049N07Rik-203ENSMUST00000220010 1989 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Sgpl1-201ENSMUST00000092498 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 C1galt1c1-201ENSMUST00000058265 1449 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Gm42536-201ENSMUST00000197562 1613 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Dsg3-201ENSMUST00000070892 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Utrn-204ENSMUST00000217994 3161 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LtbrP50284 Olfr1396-202ENSMUST00000109201 1170 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm13614-201ENSMUST00000117306 503 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Tcea1-ps1-201ENSMUST00000117942 904 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm12421-201ENSMUST00000119071 307 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm12044-201ENSMUST00000120335 213 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm27192-201ENSMUST00000136428 581 ntTSL 3 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm24002-201ENSMUST00000158456 104 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm20394-201ENSMUST00000173304 942 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm18828-201ENSMUST00000180475 857 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm26959-201ENSMUST00000182376 978 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm12117-201ENSMUST00000183831 456 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm7654-201ENSMUST00000186738 683 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm29496-201ENSMUST00000189854 693 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm43476-201ENSMUST00000197873 405 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm43203-201ENSMUST00000200130 558 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm42903-201ENSMUST00000202607 481 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Olfr1396-203ENSMUST00000203007 981 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm45901-201ENSMUST00000203807 661 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Gm44691-201ENSMUST00000207562 324 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Spaca7-203ENSMUST00000210276 715 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm45732-201ENSMUST00000212460 586 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm19709-201ENSMUST00000215403 482 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm8834-201ENSMUST00000216459 565 ntBASIC10.01□□□□□ -0.81
LtbrP50284 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Lrrc72-203ENSMUST00000221155 1141 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 CT954323.2-201ENSMUST00000222056 213 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Gm34611-201ENSMUST00000223252 627 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 AC154747.4-202ENSMUST00000223826 852 ntBASIC10.01□□□□□ -0.81
LtbrP50284 CT030238.4-201ENSMUST00000228579 801 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Ly6g-201ENSMUST00000023246 336 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Odf3l1-201ENSMUST00000055036 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LtbrP50284 Olfr1226-201ENSMUST00000099790 933 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
LtbrP50284 4933427E13Rik-202ENSMUST00000125234 1493 ntTSL 2 BASIC10.01□□□□□ -0.81
LtbrP50284 Gm29158-201ENSMUST00000186883 1494 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Fam228a-204ENSMUST00000222363 2284 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Dclre1b-201ENSMUST00000029435 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Gm37010-201ENSMUST00000194539 1704 ntBASIC10.01□□□□□ -0.81
LtbrP50284 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Trim66-201ENSMUST00000033339 4354 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Ghitm-202ENSMUST00000165649 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Syt2-201ENSMUST00000121990 6879 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Galnt7-201ENSMUST00000034021 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 Gm42397-206ENSMUST00000208808 1358 ntTSL 5 BASIC10.01□□□□□ -0.81
LtbrP50284 Serpina1c-201ENSMUST00000074051 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
LtbrP50284 AC142266.1-202ENSMUST00000227784 3733 ntBASIC10□□□□□ -0.81
LtbrP50284 Sbf2-205ENSMUST00000164759 7090 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
LtbrP50284 L3mbtl2-204ENSMUST00000172748 3368 ntTSL 1 (best) BASIC10□□□□□ -0.81
LtbrP50284 Cep55-202ENSMUST00000116506 1440 ntAPPRIS P3 TSL 5 BASIC10□□□□□ -0.81
LtbrP50284 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC10□□□□□ -0.81
LtbrP50284 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LtbrP50284 Gm12436-201ENSMUST00000131099 2959 ntTSL 1 (best) BASIC10□□□□□ -0.81
LtbrP50284 Trmt13-201ENSMUST00000041524 3402 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LtbrP50284 Tbc1d14-221ENSMUST00000171385 3884 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
LtbrP50284 Lmx1a-202ENSMUST00000111377 3200 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
LtbrP50284 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LtbrP50284 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
LtbrP50284 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC10□□□□□ -0.81
LtbrP50284 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC10□□□□□ -0.81
LtbrP50284 Zfp971-201ENSMUST00000108925 923 ntTSL 1 (best) BASIC10□□□□□ -0.81
LtbrP50284 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC10□□□□□ -0.81
LtbrP50284 Gm12142-201ENSMUST00000117114 485 ntBASIC10□□□□□ -0.81
LtbrP50284 Gm12392-201ENSMUST00000118014 938 ntBASIC10□□□□□ -0.81
LtbrP50284 Rpl36-ps1-201ENSMUST00000119508 303 ntBASIC10□□□□□ -0.81
LtbrP50284 Mup-ps16-201ENSMUST00000120085 596 ntBASIC10□□□□□ -0.81
LtbrP50284 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 118.9 ms