Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm44036-201ENSMUST00000204551 336 ntTSL 3 BASIC8.8□□□□□ -1
Traf1P39428 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC8.8□□□□□ -1
Traf1P39428 AC130219.2-201ENSMUST00000228765 807 ntBASIC8.8□□□□□ -1
Traf1P39428 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC8.8□□□□□ -1
Traf1P39428 Adcy10-201ENSMUST00000027852 5210 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Olfr1432-202ENSMUST00000207710 2068 ntAPPRIS P5 TSL 5 BASIC8.8□□□□□ -1
Traf1P39428 CT025619.3-201ENSMUST00000216299 3267 ntBASIC8.8□□□□□ -1
Traf1P39428 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Traf1P39428 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.8□□□□□ -1
Traf1P39428 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Traf1P39428 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.8□□□□□ -1
Traf1P39428 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Gm29617-206ENSMUST00000187759 1600 ntTSL 5 BASIC8.8□□□□□ -1
Traf1P39428 Gm28749-205ENSMUST00000187886 1600 ntTSL 3 BASIC8.8□□□□□ -1
Traf1P39428 Gm29000-208ENSMUST00000190932 1600 ntTSL 3 BASIC8.8□□□□□ -1
Traf1P39428 Gm37067-201ENSMUST00000195730 1628 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm44509-201ENSMUST00000205400 1324 ntBASIC8.8□□□□□ -1
Traf1P39428 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC8.79□□□□□ -1
Traf1P39428 Gbp11-201ENSMUST00000100960 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Cacna1c-207ENSMUST00000186889 13162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Gm37426-201ENSMUST00000195241 2470 ntBASIC8.79□□□□□ -1
Traf1P39428 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Stat2-201ENSMUST00000085708 4394 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC8.79□□□□□ -1
Traf1P39428 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Gm42678-201ENSMUST00000197163 2221 ntBASIC8.79□□□□□ -1
Traf1P39428 Mir503-201ENSMUST00000102168 71 ntBASIC8.79□□□□□ -1
Traf1P39428 Atp5h-203ENSMUST00000106537 682 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Traf1P39428 Il12a-202ENSMUST00000107816 1268 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Gm16523-201ENSMUST00000121253 592 ntBASIC8.79□□□□□ -1
Traf1P39428 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC8.79□□□□□ -1
Traf1P39428 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.79□□□□□ -1
Traf1P39428 Esd-203ENSMUST00000175887 809 ntTSL 5 BASIC8.79□□□□□ -1
Traf1P39428 Gm20111-201ENSMUST00000184830 319 ntBASIC8.79□□□□□ -1
Traf1P39428 Gm44252-201ENSMUST00000204187 330 ntBASIC8.79□□□□□ -1
Traf1P39428 Gm44577-201ENSMUST00000207413 1284 ntTSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Gm44692-201ENSMUST00000207441 901 ntTSL 3 BASIC8.79□□□□□ -1
Traf1P39428 Gm45282-201ENSMUST00000209439 681 ntTSL 3 BASIC8.79□□□□□ -1
Traf1P39428 Gm4796-201ENSMUST00000219802 624 ntBASIC8.79□□□□□ -1
Traf1P39428 CT009718.2-202ENSMUST00000222092 704 ntTSL 2 BASIC8.79□□□□□ -1
Traf1P39428 Diaph3-204ENSMUST00000226254 682 ntBASIC8.79□□□□□ -1
Traf1P39428 Il1f6-201ENSMUST00000028361 883 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Traf1P39428 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Traf1P39428 Klf10-202ENSMUST00000226363 2917 ntBASIC8.79□□□□□ -1
Traf1P39428 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Traf1P39428 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC8.79□□□□□ -1
Traf1P39428 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Traf1P39428 Gm42700-201ENSMUST00000199071 2437 ntBASIC8.79□□□□□ -1
Traf1P39428 Apbb2-204ENSMUST00000159786 6333 ntTSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Gm43331-201ENSMUST00000197991 1689 ntBASIC8.78□□□□□ -1
Traf1P39428 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Traf1P39428 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Traf1P39428 Slc12a6-201ENSMUST00000028549 6105 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Gm42478-201ENSMUST00000199252 1467 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.78□□□□□ -1
Traf1P39428 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Olfr1564-204ENSMUST00000213751 5418 ntAPPRIS ALT1 TSL 5 BASIC8.78□□□□□ -1
Traf1P39428 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Gm22470-201ENSMUST00000104117 130 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Traf1P39428 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Traf1P39428 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Traf1P39428 Gm11926-201ENSMUST00000118520 430 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm12601-201ENSMUST00000118994 846 ntBASIC8.78□□□□□ -1
Traf1P39428 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm14826-201ENSMUST00000121284 901 ntBASIC8.78□□□□□ -1
Traf1P39428 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.78□□□□□ -1
Traf1P39428 Gm24422-201ENSMUST00000157800 119 ntBASIC8.78□□□□□ -1
Traf1P39428 Skint8-205ENSMUST00000165046 1280 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Gm7991-201ENSMUST00000168668 591 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm6536-201ENSMUST00000171180 615 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm27401-201ENSMUST00000184052 173 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm8883-202ENSMUST00000188258 545 ntTSL 3 BASIC8.78□□□□□ -1
Traf1P39428 Gm38063-201ENSMUST00000193990 342 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm37724-201ENSMUST00000195240 1221 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm5708-201ENSMUST00000196289 886 ntBASIC8.78□□□□□ -1
Traf1P39428 Gm5723-201ENSMUST00000203096 432 ntBASIC8.78□□□□□ -1
Traf1P39428 4930425L21Rik-201ENSMUST00000203439 899 ntTSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC8.78□□□□□ -1
Traf1P39428 Gm31663-202ENSMUST00000208481 1190 ntBASIC8.78□□□□□ -1
Traf1P39428 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.78□□□□□ -1
Traf1P39428 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Traf1P39428 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Traf1P39428 Gm45737-201ENSMUST00000208344 1612 ntBASIC8.78□□□□□ -1
Traf1P39428 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC8.78□□□□□ -1
Traf1P39428 Olfr1346-202ENSMUST00000207658 4429 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Traf1P39428 Slc25a53-214ENSMUST00000171738 2567 ntAPPRIS P1 TSL 2 BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 93.2 ms