Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm15739-201ENSMUST00000118049 872 ntBASIC6.21□□□□□ -1.42
Col8a2P25318 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm10157-201ENSMUST00000139408 343 ntBASIC6.21□□□□□ -1.42
Col8a2P25318 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Ly6k-202ENSMUST00000168815 612 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm8305-201ENSMUST00000180022 1195 ntBASIC6.21□□□□□ -1.42
Col8a2P25318 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm9556-201ENSMUST00000182938 940 ntBASIC6.21□□□□□ -1.42
Col8a2P25318 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.21□□□□□ -1.42
Col8a2P25318 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.21□□□□□ -1.42
Col8a2P25318 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm37907-201ENSMUST00000195644 846 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm44418-201ENSMUST00000204219 705 ntTSL 3 BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm44258-201ENSMUST00000204925 301 ntBASIC6.21□□□□□ -1.42
Col8a2P25318 Gm45627-201ENSMUST00000210130 977 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm3428-204ENSMUST00000214488 1020 ntTSL 5 BASIC6.21□□□□□ -1.42
Col8a2P25318 AC116502.1-201ENSMUST00000220989 291 ntBASIC6.21□□□□□ -1.42
Col8a2P25318 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col8a2P25318 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col8a2P25318 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Zbtb44-202ENSMUST00000167346 1308 ntTSL 3 BASIC6.21□□□□□ -1.42
Col8a2P25318 AC159264.1-201ENSMUST00000224844 4257 ntBASIC6.21□□□□□ -1.42
Col8a2P25318 Fbln5-201ENSMUST00000021603 5829 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
Col8a2P25318 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Mcm10-201ENSMUST00000027980 3494 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Olfr1189-202ENSMUST00000213679 1983 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col8a2P25318 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Pfkfb3-206ENSMUST00000114846 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC6.2□□□□□ -1.42
Col8a2P25318 Gm18194-202ENSMUST00000210952 3442 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Col8a2P25318 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a2P25318 Dsg4-201ENSMUST00000019426 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col8a2P25318 Stmn1-203ENSMUST00000105868 967 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Uros-202ENSMUST00000106144 1045 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Gm17184-201ENSMUST00000111864 462 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Serpina3h-202ENSMUST00000116393 1226 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm16221-201ENSMUST00000117331 393 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm7910-201ENSMUST00000117896 835 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col8a2P25318 Gm12402-201ENSMUST00000120536 334 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm13282-201ENSMUST00000121577 545 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Amy2-ps1-201ENSMUST00000122117 1117 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC6.2□□□□□ -1.42
Col8a2P25318 Gm24824-201ENSMUST00000175097 78 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm27373-201ENSMUST00000184017 184 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Ly6g-202ENSMUST00000190262 941 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col8a2P25318 Gm38254-201ENSMUST00000192276 1009 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm42734-201ENSMUST00000201656 878 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Crcp-206ENSMUST00000202756 600 ntTSL 2 BASIC6.2□□□□□ -1.42
Col8a2P25318 Gm5305-201ENSMUST00000204010 746 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm44112-201ENSMUST00000204787 372 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm35521-201ENSMUST00000211285 440 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm45864-201ENSMUST00000211965 1019 ntTSL 2 BASIC6.2□□□□□ -1.42
Col8a2P25318 Cryab-203ENSMUST00000214962 846 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Col8a2P25318 Fam47e-201ENSMUST00000082382 750 ntTSL 5 BASIC6.2□□□□□ -1.42
Col8a2P25318 Olfr1427-201ENSMUST00000087825 938 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a2P25318 Olfr1259-201ENSMUST00000090695 930 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a2P25318 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Col8a2P25318 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Gm45201-201ENSMUST00000207187 2679 ntBASIC6.2□□□□□ -1.42
Col8a2P25318 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Col8a2P25318 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Col8a2P25318 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Col8a2P25318 Gm40055-201ENSMUST00000196091 2742 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a2P25318 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
Col8a2P25318 Ctnna2-202ENSMUST00000159626 3908 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a2P25318 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC6.19□□□□□ -1.42
Col8a2P25318 C230079O03Rik-201ENSMUST00000209560 1385 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a2P25318 Olfr605-202ENSMUST00000215417 2921 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Col8a2P25318 Gm16427-202ENSMUST00000200745 1749 ntAPPRIS P5 TSL 2 BASIC6.19□□□□□ -1.42
Col8a2P25318 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a2P25318 Kcnj15-207ENSMUST00000113861 3385 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a2P25318 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a2P25318 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a2P25318 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Col8a2P25318 Grhl1-201ENSMUST00000020985 3070 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Col8a2P25318 Carf-206ENSMUST00000180952 2157 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 242.5 ms