Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Pogz-203ENSMUST00000107266 4100 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Bdnf-204ENSMUST00000111044 3854 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
BdnfP21237 Gm15074-201ENSMUST00000117603 936 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm12310-201ENSMUST00000118013 492 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm15421-202ENSMUST00000118224 399 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm13921-201ENSMUST00000119411 463 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm11955-201ENSMUST00000119801 470 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm13586-201ENSMUST00000121784 464 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC7.39□□□□□ -1.23
BdnfP21237 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC7.39□□□□□ -1.23
BdnfP21237 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC7.39□□□□□ -1.23
BdnfP21237 Gm14376-201ENSMUST00000145297 297 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Gm26048-201ENSMUST00000157305 142 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm24063-201ENSMUST00000157491 105 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC7.39□□□□□ -1.23
BdnfP21237 Gm8696-201ENSMUST00000174777 385 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm27782-201ENSMUST00000185059 199 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 Gm28193-201ENSMUST00000189863 615 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm18797-201ENSMUST00000190809 1174 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm37293-201ENSMUST00000191658 295 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm37560-201ENSMUST00000194289 1000 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm37480-201ENSMUST00000194795 550 ntTSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 Mark4-ps-201ENSMUST00000196140 384 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm43247-201ENSMUST00000198638 481 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Gm43840-201ENSMUST00000199444 484 ntBASIC7.39□□□□□ -1.23
BdnfP21237 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
BdnfP21237 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
BdnfP21237 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Gm35035-201ENSMUST00000218838 628 ntTSL 3 BASIC7.39□□□□□ -1.23
BdnfP21237 Gm7239-201ENSMUST00000220981 860 ntBASIC7.39□□□□□ -1.23
BdnfP21237 A930040O22Rik-201ENSMUST00000221662 973 ntBASIC7.39□□□□□ -1.23
BdnfP21237 1700028K03Rik-201ENSMUST00000058921 797 ntAPPRIS P3 TSL 2 BASIC7.39□□□□□ -1.23
BdnfP21237 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 AC140409.2-201ENSMUST00000216936 3079 ntTSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC7.39□□□□□ -1.23
BdnfP21237 Taf13-204ENSMUST00000143054 2443 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Zfp207-203ENSMUST00000108216 2152 ntTSL 2 BASIC7.39□□□□□ -1.23
BdnfP21237 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
BdnfP21237 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC7.38□□□□□ -1.23
BdnfP21237 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
BdnfP21237 Slfn9-201ENSMUST00000038211 5769 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
BdnfP21237 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC7.38□□□□□ -1.23
BdnfP21237 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Trpm8-202ENSMUST00000113114 4112 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC7.38□□□□□ -1.23
BdnfP21237 Gm44898-201ENSMUST00000205934 2223 ntBASIC7.38□□□□□ -1.23
BdnfP21237 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC7.38□□□□□ -1.23
BdnfP21237 Gm26344-201ENSMUST00000104553 132 ntBASIC7.38□□□□□ -1.23
BdnfP21237 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Gm12870-201ENSMUST00000121383 1016 ntBASIC7.38□□□□□ -1.23
BdnfP21237 n-R5s76-201ENSMUST00000122700 113 ntBASIC7.38□□□□□ -1.23
BdnfP21237 Bnip1-206ENSMUST00000135824 629 ntTSL 5 BASIC7.38□□□□□ -1.23
BdnfP21237 Lypd8-201ENSMUST00000013787 1093 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC7.38□□□□□ -1.23
BdnfP21237 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC7.38□□□□□ -1.23
BdnfP21237 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC7.38□□□□□ -1.23
BdnfP21237 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC7.38□□□□□ -1.23
BdnfP21237 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Gm29143-201ENSMUST00000189462 201 ntBASIC7.38□□□□□ -1.23
BdnfP21237 D7Ertd128e-201ENSMUST00000189744 928 ntTSL 2 BASIC7.38□□□□□ -1.23
BdnfP21237 Gm38254-201ENSMUST00000192276 1009 ntBASIC7.38□□□□□ -1.23
BdnfP21237 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC7.38□□□□□ -1.23
BdnfP21237 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC7.38□□□□□ -1.23
BdnfP21237 Gm19104-201ENSMUST00000198392 679 ntBASIC7.38□□□□□ -1.23
BdnfP21237 A930014E10Rik-201ENSMUST00000205115 546 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC7.38□□□□□ -1.23
BdnfP21237 AC105169.1-201ENSMUST00000218912 1294 ntBASIC7.38□□□□□ -1.23
BdnfP21237 AL645704.1-201ENSMUST00000221642 604 ntBASIC7.38□□□□□ -1.23
BdnfP21237 CT009515.2-201ENSMUST00000226126 736 ntBASIC7.38□□□□□ -1.23
BdnfP21237 AC147096.1-201ENSMUST00000227648 352 ntBASIC7.38□□□□□ -1.23
BdnfP21237 CT025523.1-201ENSMUST00000228318 694 ntBASIC7.38□□□□□ -1.23
BdnfP21237 Gm26132-201ENSMUST00000083166 148 ntBASIC7.38□□□□□ -1.23
BdnfP21237 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
BdnfP21237 Olfr466-202ENSMUST00000214214 4192 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms