Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC6.13□□□□□ -1.43
Cdx1P18111 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Olfr1085-202ENSMUST00000213279 5191 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cdx1P18111 Entpd3-201ENSMUST00000047687 3453 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Gm43429-201ENSMUST00000197889 2251 ntBASIC6.13□□□□□ -1.43
Cdx1P18111 Olfr1500-207ENSMUST00000219674 2287 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
Cdx1P18111 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
Cdx1P18111 F2rl2-201ENSMUST00000022182 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
Cdx1P18111 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm42653-201ENSMUST00000200644 2839 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Sec24c-202ENSMUST00000223751 4196 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm26344-201ENSMUST00000104553 132 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm11875-201ENSMUST00000118187 799 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Rps6-ps4-201ENSMUST00000118499 750 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm7645-201ENSMUST00000119008 788 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm5761-201ENSMUST00000119238 834 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm13683-201ENSMUST00000119497 1076 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm13666-201ENSMUST00000120032 799 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm8172-201ENSMUST00000120762 750 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm13854-201ENSMUST00000121183 1679 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Mir1903-201ENSMUST00000122574 80 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm15742-201ENSMUST00000123905 659 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdx1P18111 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm12514-201ENSMUST00000142782 568 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm26048-201ENSMUST00000157305 142 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Etnppl-202ENSMUST00000163620 1482 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm20319-201ENSMUST00000172522 771 ntTSL 2 BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm4246-201ENSMUST00000172822 216 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm5839-201ENSMUST00000182835 1007 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdx1P18111 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm5539-201ENSMUST00000192177 966 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm37371-201ENSMUST00000194837 392 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm37309-201ENSMUST00000194994 1639 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm43158-201ENSMUST00000198484 1555 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm42760-201ENSMUST00000199814 311 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC6.12□□□□□ -1.43
Cdx1P18111 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm39662-201ENSMUST00000211909 1227 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdx1P18111 Lrrc46-201ENSMUST00000021251 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Rpl32l-201ENSMUST00000216127 399 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Gm46199-201ENSMUST00000220373 1693 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 1700123O20Rik-203ENSMUST00000227269 893 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdx1P18111 AC152394.1-201ENSMUST00000227360 1086 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 AC107453.3-201ENSMUST00000228205 639 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Slurp1-201ENSMUST00000023261 567 ntTSL 5 BASIC6.12□□□□□ -1.43
Cdx1P18111 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm6083-201ENSMUST00000075518 357 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.12□□□□□ -1.43
Cdx1P18111 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 n-R5s156-201ENSMUST00000083377 105 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Snora74a-201ENSMUST00000083715 196 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Olfr1424-201ENSMUST00000087830 942 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
Cdx1P18111 Btg1-ps2-201ENSMUST00000089060 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Dyrk1a-201ENSMUST00000023614 5754 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
Cdx1P18111 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Cdx1P18111 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
Cdx1P18111 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
Cdx1P18111 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Dbt-201ENSMUST00000000349 3301 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.12□□□□□ -1.43
Cdx1P18111 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Cdx1P18111 Vps8-207ENSMUST00000122235 2521 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Adam3-209ENSMUST00000171438 2501 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Cdx1P18111 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Oprk1-203ENSMUST00000160339 2481 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx1P18111 AC165260.6-202ENSMUST00000224959 1958 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Pabpc4l-201ENSMUST00000166505 5218 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
Cdx1P18111 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Olfr957-202ENSMUST00000216177 1726 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
Cdx1P18111 Xlr5c-202ENSMUST00000114503 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Cdx1P18111 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
Cdx1P18111 AC132384.7-201ENSMUST00000220198 1391 ntBASIC6.11□□□□□ -1.43
Cdx1P18111 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 276.9 ms