Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Esrrg-203ENSMUST00000110939 4833 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 AC107763.1-202ENSMUST00000225021 2663 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Vmn2r114-201ENSMUST00000168033 2571 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Nbr1-204ENSMUST00000107208 4344 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Ighv9-2-201ENSMUST00000103472 351 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm24790-201ENSMUST00000104285 132 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm24179-201ENSMUST00000158925 127 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Gm8924-201ENSMUST00000197405 1132 ntBASIC7.18□□□□□ -1.26
Col6a3E9PWQ3 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm7982-202ENSMUST00000136313 1536 ntAPPRIS P5 TSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Abcb1b-201ENSMUST00000009058 4306 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Olfr1532-ps1-202ENSMUST00000207492 2414 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Arhgap19-201ENSMUST00000026150 5103 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm31343-201ENSMUST00000207967 2454 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Zfp84-201ENSMUST00000032802 4113 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Itga10-202ENSMUST00000119365 5035 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Itga10-201ENSMUST00000029744 5044 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Slco1c1-206ENSMUST00000205214 2515 ntTSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Mir6943-201ENSMUST00000185186 66 ntBASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm35315-202ENSMUST00000210052 3523 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Dpp6-203ENSMUST00000120555 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Rcbtb2-218ENSMUST00000169479 3351 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Cndp1-201ENSMUST00000070139 2818 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Serpina3f-202ENSMUST00000121337 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Olfr73-202ENSMUST00000129056 3048 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Zfp74-201ENSMUST00000032797 2040 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm26429-201ENSMUST00000104829 110 ntBASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm16144-201ENSMUST00000131093 827 ntTSL 2 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm12081-201ENSMUST00000152849 501 ntTSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm23533-201ENSMUST00000157540 245 ntBASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm18700-201ENSMUST00000185791 553 ntBASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 4930452L12Rik-201ENSMUST00000220158 785 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Dapp1-201ENSMUST00000029806 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Trim43c-202ENSMUST00000186363 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Spty2d1-201ENSMUST00000061639 5223 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
Col6a3E9PWQ3 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Sptssb-201ENSMUST00000051239 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm37675-201ENSMUST00000192303 2847 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Cept1-202ENSMUST00000068301 2814 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Rrp8-202ENSMUST00000098148 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm12768-201ENSMUST00000120055 759 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm15480-201ENSMUST00000120442 519 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 1700025K24Rik-201ENSMUST00000190635 740 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm45874-201ENSMUST00000212423 346 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 AC154595.2-201ENSMUST00000225067 310 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 n-R5s173-201ENSMUST00000082620 119 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Rdh16-201ENSMUST00000071646 3207 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Tex9-201ENSMUST00000085358 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Galk2-201ENSMUST00000028636 2605 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 AC120153.1-201ENSMUST00000226502 1311 ntBASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 AC123842.1-201ENSMUST00000217622 3118 ntTSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Ncoa2-201ENSMUST00000006037 4897 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.16□□□□□ -1.26
Col6a3E9PWQ3 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC7.16□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.6 ms