Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Vmn1r190-ps-201ENSMUST00000155950 903 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm3611-201ENSMUST00000173687 877 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm25442-201ENSMUST00000177270 92 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm26729-201ENSMUST00000180744 352 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Mir6999-201ENSMUST00000183498 61 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm3142-201ENSMUST00000190107 414 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm5190-201ENSMUST00000192434 357 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm38063-201ENSMUST00000193990 342 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm42424-201ENSMUST00000198319 376 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 AC163296.1-202ENSMUST00000218395 661 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Ryk-ps1-201ENSMUST00000219713 235 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 AC163296.1-201ENSMUST00000220004 1266 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Trap1a-201ENSMUST00000054534 1178 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm25259-201ENSMUST00000083048 193 ntBASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Gm31182-201ENSMUST00000219061 2391 ntTSL 5 BASIC5.9□□□□□ -1.46
Gm12887B1AVM1 Senp8-207ENSMUST00000217093 1663 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 AC125074.1-201ENSMUST00000227970 1331 ntBASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 AC163660.4-201ENSMUST00000224983 2171 ntBASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Foxp1-206ENSMUST00000113326 7029 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Zfp280d-203ENSMUST00000183410 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Gm37347-201ENSMUST00000193969 3071 ntBASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Impg2-204ENSMUST00000160116 3992 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Zfp748-202ENSMUST00000181892 5293 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
Gm12887B1AVM1 C87499-201ENSMUST00000053304 1901 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm42577-201ENSMUST00000201367 3211 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 AC121286.2-201ENSMUST00000218069 2470 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm43488-201ENSMUST00000198874 2504 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm43023-201ENSMUST00000197583 2106 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Ndst3-201ENSMUST00000029602 5335 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm22438-201ENSMUST00000104049 132 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm8818-201ENSMUST00000110797 1047 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm14864-201ENSMUST00000116164 1087 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm14056-201ENSMUST00000117198 642 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm5752-201ENSMUST00000117771 594 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm13005-201ENSMUST00000119518 585 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm16523-201ENSMUST00000121253 592 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm12464-201ENSMUST00000121385 1016 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm25372-201ENSMUST00000158161 255 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 n-R5s115-201ENSMUST00000179019 119 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Zfp493-203ENSMUST00000181319 730 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Mir6973a-201ENSMUST00000183646 78 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm29739-201ENSMUST00000191760 529 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm45145-203ENSMUST00000208872 958 ntTSL 5 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm4536-201ENSMUST00000209157 542 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 AC069562.1-201ENSMUST00000224206 434 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 AC163038.4-201ENSMUST00000224942 474 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 AC154738.3-201ENSMUST00000227953 409 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 n-R5s193-201ENSMUST00000082864 109 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Tardbp-203ENSMUST00000095719 1011 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Gm12887B1AVM1 CT009604.1-201ENSMUST00000223900 1328 ntBASIC5.89□□□□□ -1.47
Gm12887B1AVM1 2610020C07Rik-201ENSMUST00000181526 2925 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 176.6 ms