Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Scn3aA2ASI5 5830408C22Rik-203ENSMUST00000210596 326 ntTSL 3 BASIC8.29□□□□□ -1.08
Scn3aA2ASI5 AC131033.1-201ENSMUST00000228223 279 ntBASIC8.29□□□□□ -1.08
Scn3aA2ASI5 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Scn3aA2ASI5 n-R5s29-201ENSMUST00000082836 119 ntBASIC8.29□□□□□ -1.08
Scn3aA2ASI5 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Scn3aA2ASI5 Vmn1r195-201ENSMUST00000091736 1088 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Scn3aA2ASI5 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Scn3aA2ASI5 Cpsf2-201ENSMUST00000047357 5732 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Scn3aA2ASI5 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Scn3aA2ASI5 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Apobec3-202ENSMUST00000109620 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Vps8-206ENSMUST00000118923 4838 ntTSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Anxa1-201ENSMUST00000025561 1674 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Kif5a-202ENSMUST00000217895 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Lyrm1-205ENSMUST00000207270 5845 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Usp45-201ENSMUST00000040429 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Kcnb2-202ENSMUST00000175681 3963 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Alpk1-201ENSMUST00000029662 4795 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Klf10-202ENSMUST00000226363 2917 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Deptor-201ENSMUST00000023056 3300 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm8421-201ENSMUST00000119439 305 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm15007-201ENSMUST00000119982 710 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm26321-201ENSMUST00000157740 242 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm9127-201ENSMUST00000188041 985 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm37526-201ENSMUST00000194640 619 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 AC140477.3-201ENSMUST00000222271 475 ntTSL 3 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Synpo2-207ENSMUST00000198584 9203 ntAPPRIS ALT2 TSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm43519-201ENSMUST00000197239 1872 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Stt3a-201ENSMUST00000120381 5867 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Scn3aA2ASI5 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Scn3aA2ASI5 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.08
Scn3aA2ASI5 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Scn3aA2ASI5 Gm28867-201ENSMUST00000190194 2166 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Scn3aA2ASI5 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC8.27□□□□□ -1.08
Scn3aA2ASI5 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC8.27□□□□□ -1.08
Scn3aA2ASI5 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC8.27□□□□□ -1.08
Scn3aA2ASI5 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm12104-201ENSMUST00000120359 979 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm16284-201ENSMUST00000140995 400 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm17022-201ENSMUST00000166415 922 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Krtap11-1-201ENSMUST00000171542 1008 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm29626-202ENSMUST00000191517 425 ntTSL 5 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm38030-201ENSMUST00000192376 475 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm42650-201ENSMUST00000197038 575 ntTSL 2 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm5050-201ENSMUST00000197164 775 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm6213-201ENSMUST00000209966 638 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 AC115304.1-202ENSMUST00000226850 837 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 4930505O20Rik-201ENSMUST00000142188 1758 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Elmo2-205ENSMUST00000103091 4695 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm44895-201ENSMUST00000206670 1538 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 9230106D20Rik-201ENSMUST00000052806 1406 ntTSL 5 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Oasl2-201ENSMUST00000031542 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Olfr26-201ENSMUST00000104874 931 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm14631-201ENSMUST00000119067 594 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm13444-201ENSMUST00000119445 522 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm6142-201ENSMUST00000120290 325 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm13221-201ENSMUST00000121712 430 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm23888-201ENSMUST00000122690 253 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm15123-201ENSMUST00000138988 339 ntTSL 3 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm12145-201ENSMUST00000142108 217 ntTSL 3 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Stau2-209ENSMUST00000145092 564 ntTSL 5 BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm3549-201ENSMUST00000203873 794 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Helt-202ENSMUST00000210652 1282 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm18655-201ENSMUST00000214802 1090 ntBASIC8.27□□□□□ -1.09
Scn3aA2ASI5 Gm35638-201ENSMUST00000220724 652 ntBASIC8.27□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms