Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm15286-201ENSMUST00000150623 743 ntTSL 3 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm24130-201ENSMUST00000158536 151 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm22948-201ENSMUST00000158561 243 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm6428-201ENSMUST00000161062 345 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 1700016L21Rik-202ENSMUST00000189139 629 ntTSL 3 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm42932-201ENSMUST00000197280 744 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm18484-201ENSMUST00000204389 991 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm4780-201ENSMUST00000213206 1242 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 AC146596.1-201ENSMUST00000223507 223 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Crisp4-201ENSMUST00000026876 1252 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm20900-201ENSMUST00000078729 472 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Prl6a1-201ENSMUST00000091679 1093 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 5330413P13Rik-202ENSMUST00000143453 3630 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm12608-201ENSMUST00000122013 1715 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm29226-201ENSMUST00000186871 2167 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Patj-203ENSMUST00000102792 3755 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Greb1-212ENSMUST00000162112 8058 ntAPPRIS P3 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm43429-201ENSMUST00000197889 2251 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm11282-201ENSMUST00000119018 1416 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Golga3-201ENSMUST00000031477 4805 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gpm6b-202ENSMUST00000112223 4764 ntAPPRIS ALT1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Ceacam1-208ENSMUST00000206676 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm15665-201ENSMUST00000119116 847 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Cbx5-203ENSMUST00000122182 1146 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm24139-201ENSMUST00000122780 288 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Cd48-201ENSMUST00000015499 922 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm22795-201ENSMUST00000157233 118 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm8046-201ENSMUST00000172151 616 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Obox3-ps4-201ENSMUST00000176026 1005 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm18254-201ENSMUST00000185699 1204 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm5547-203ENSMUST00000200182 683 ntTSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Rtp4-204ENSMUST00000211349 842 ntTSL 3 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Mplkip-202ENSMUST00000221480 582 ntTSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 AC164294.1-201ENSMUST00000224682 688 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 AC125087.1-201ENSMUST00000227552 514 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Olfr609-201ENSMUST00000055787 965 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Vmn1r198-201ENSMUST00000091733 903 ntAPPRIS P2 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Klf5-202ENSMUST00000226784 2852 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 2610203C22Rik-204ENSMUST00000148585 3475 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm45537-201ENSMUST00000211539 2708 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Hecw2-203ENSMUST00000120904 11263 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm43970-201ENSMUST00000204346 3605 ntBASIC7.19□□□□□ -1.26
Upk3aQ9JKX8 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 CT030170.4-203ENSMUST00000221062 1403 ntTSL 5 BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Olfr1-201ENSMUST00000120303 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Smco3-201ENSMUST00000068293 2056 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 A730011C13Rik-202ENSMUST00000141787 1877 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Ttc17-201ENSMUST00000055081 3163 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Igkv4-51-201ENSMUST00000103345 394 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm22438-201ENSMUST00000104049 132 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Defa-ps7-201ENSMUST00000117139 168 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Mageb8-ps-201ENSMUST00000117228 1033 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm5752-201ENSMUST00000117771 594 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm13038-201ENSMUST00000119886 459 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm5255-201ENSMUST00000120125 642 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm11343-201ENSMUST00000120579 599 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm13282-201ENSMUST00000121577 545 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm24893-201ENSMUST00000122745 369 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Rps16-ps2-201ENSMUST00000140155 441 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm13840-201ENSMUST00000149608 256 ntTSL 2 BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm26182-201ENSMUST00000157688 116 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Gm22206-201ENSMUST00000158612 116 ntBASIC7.18□□□□□ -1.26
Upk3aQ9JKX8 Slc29a1-208ENSMUST00000164769 1226 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms