Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm13301-201ENSMUST00000121728 2446 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm24071-201ENSMUST00000104520 132 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm5915-201ENSMUST00000116136 454 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm24195-201ENSMUST00000116804 137 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm15154-201ENSMUST00000117590 366 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm15062-201ENSMUST00000120567 367 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm15543-201ENSMUST00000141307 361 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm26351-201ENSMUST00000157532 232 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm16573-203ENSMUST00000162231 807 ntTSL 2 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm40421-201ENSMUST00000218991 658 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 AC164424.3-201ENSMUST00000220809 148 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 AC166358.8-201ENSMUST00000223288 105 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 AC124739.1-201ENSMUST00000223433 148 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 AC162940.1-201ENSMUST00000224745 1167 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm8186-201ENSMUST00000053575 386 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 3110009E18Rik-202ENSMUST00000056038 401 ntTSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 4930563M21Rik-201ENSMUST00000060468 792 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm8882-201ENSMUST00000080849 1240 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm9256-201ENSMUST00000198106 1420 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm2654-201ENSMUST00000221381 1592 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm36640-201ENSMUST00000203686 5934 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Scn3a-202ENSMUST00000100069 8550 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Ep400-201ENSMUST00000041558 10608 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Sema6a-202ENSMUST00000076043 4123 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm44014-201ENSMUST00000205150 1509 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Use1Q9CQ56 Gm43398-201ENSMUST00000196584 2742 ntBASIC7.06□□□□□ -1.28
Use1Q9CQ56 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Ceacam2-203ENSMUST00000066503 3140 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Olfr1284-201ENSMUST00000062407 1774 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 4933411E06Rik-201ENSMUST00000186016 1493 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm38288-201ENSMUST00000195330 1320 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm5903-201ENSMUST00000121836 2325 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gpalpp1-201ENSMUST00000022585 5389 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm6509-202ENSMUST00000201552 1582 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Map2-202ENSMUST00000077355 5125 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Cisd3-202ENSMUST00000107584 546 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm15753-201ENSMUST00000119241 1062 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Mir1968-201ENSMUST00000157429 68 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 9130230L23Rik-201ENSMUST00000165250 492 ntAPPRIS P1 TSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Mir3078-201ENSMUST00000175231 87 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm20702-201ENSMUST00000176181 460 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 A530083I20Rik-202ENSMUST00000180877 1022 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm29126-201ENSMUST00000188686 151 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm29273-201ENSMUST00000188880 262 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm38306-201ENSMUST00000193954 237 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm19254-201ENSMUST00000204828 294 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm34225-203ENSMUST00000206921 572 ntTSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm4972-201ENSMUST00000211108 1254 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Cd24a-202ENSMUST00000214476 743 ntAPPRIS ALT2 TSL 3 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 4930521O17Rik-201ENSMUST00000219339 491 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gm18629-201ENSMUST00000222496 884 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 AC131745.3-201ENSMUST00000223582 554 ntBASIC7.05□□□□□ -1.28
Use1Q9CQ56 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Ifna4-201ENSMUST00000094973 561 ntAPPRIS P1 BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Cd36-203ENSMUST00000169095 2677 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
Use1Q9CQ56 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC7.05□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.2 ms