Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm28439-201ENSMUST00000187714 876 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm29288-201ENSMUST00000191582 901 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Ighv6-2-201ENSMUST00000192430 295 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm37533-201ENSMUST00000193848 545 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm36996-201ENSMUST00000194466 250 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Ighv10-2-201ENSMUST00000195182 298 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 AC132384.10-201ENSMUST00000217862 1204 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 AC154904.1-201ENSMUST00000219510 312 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm19189-201ENSMUST00000221689 754 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 AC134439.2-201ENSMUST00000221950 467 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 AC122877.1-201ENSMUST00000228873 218 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Olfr1280-201ENSMUST00000082167 1003 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Olfr1283-201ENSMUST00000090328 1026 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm6494-201ENSMUST00000218604 2298 ntBASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Trdmt1-202ENSMUST00000124488 3788 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
Trim8Q99PJ2 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Arnt-205ENSMUST00000107161 4260 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Nup93-207ENSMUST00000212824 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Wdr76-204ENSMUST00000110603 2341 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Cyp2d12-201ENSMUST00000068861 1614 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm5761-201ENSMUST00000119238 834 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm13921-201ENSMUST00000119411 463 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm12817-201ENSMUST00000119622 610 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm11955-201ENSMUST00000119801 470 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm13586-201ENSMUST00000121784 464 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Rasgef1b-207ENSMUST00000166484 1296 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm26736-201ENSMUST00000180425 1236 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 9330179D12Rik-202ENSMUST00000180811 1001 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm28983-201ENSMUST00000186685 614 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm28150-201ENSMUST00000187305 614 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm28377-201ENSMUST00000189695 720 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm37185-201ENSMUST00000193852 410 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm37108-201ENSMUST00000194605 626 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm43382-201ENSMUST00000198954 838 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm43840-201ENSMUST00000199444 484 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm34597-201ENSMUST00000211189 633 ntTSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 AC166256.1-201ENSMUST00000219081 1271 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 AC158536.1-201ENSMUST00000222510 256 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Olfr290-201ENSMUST00000073468 948 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm36933-201ENSMUST00000194945 3071 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gucy1b2-201ENSMUST00000022501 2711 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm21152-201ENSMUST00000190271 3483 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm37906-201ENSMUST00000192050 3035 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Gm43606-201ENSMUST00000195938 3556 ntBASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Trim8Q99PJ2 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Trim8Q99PJ2 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Trim8Q99PJ2 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
Trim8Q99PJ2 Itga1-201ENSMUST00000061673 10967 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms