Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm45379-201ENSMUST00000211772 549 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Tbc1d7-204ENSMUST00000220787 892 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 AC158535.1-201ENSMUST00000221487 769 ntTSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 AC161252.2-201ENSMUST00000224978 374 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 AC154239.2-201ENSMUST00000227859 233 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Prh1-201ENSMUST00000074042 819 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Vmn1r78-201ENSMUST00000078039 942 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm13304-201ENSMUST00000098123 837 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Trub1-202ENSMUST00000026073 3795 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 D430042O09Rik-201ENSMUST00000069660 6148 ntAPPRIS P2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Aqp9-203ENSMUST00000113570 1712 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm46430-207ENSMUST00000222254 1703 ntTSL 5 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 AC165260.6-201ENSMUST00000225447 1735 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm42515-201ENSMUST00000199936 3583 ntBASIC8.59□□□□□ -1.03
Clp1Q99LI9 Phactr1-205ENSMUST00000128646 5430 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Cdh16-201ENSMUST00000163783 2910 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Nup107-202ENSMUST00000167943 3098 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gata4-203ENSMUST00000121312 2407 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
Clp1Q99LI9 Gm7389-201ENSMUST00000181162 2884 ntBASIC8.59□□□□□ -1.04
Clp1Q99LI9 Acbd5-202ENSMUST00000114523 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
Clp1Q99LI9 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Rapgef5-206ENSMUST00000222185 5508 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Fras1-201ENSMUST00000036019 15848 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Ankrd49-201ENSMUST00000034406 1753 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Mrpl15-206ENSMUST00000156816 4203 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 9330136K24Rik-201ENSMUST00000180842 2478 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Otoa-201ENSMUST00000047025 3773 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Helz2-202ENSMUST00000108831 10109 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 2900018N21Rik-201ENSMUST00000195805 1580 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm15665-201ENSMUST00000119116 847 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm13038-201ENSMUST00000119886 459 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm7571-201ENSMUST00000120252 927 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm9159-201ENSMUST00000120661 566 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm15009-201ENSMUST00000121387 322 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm14102-201ENSMUST00000147678 464 ntTSL 2 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm11335-201ENSMUST00000148743 1080 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm25413-201ENSMUST00000158544 312 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm23639-201ENSMUST00000175078 132 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm22111-201ENSMUST00000178010 79 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm23687-201ENSMUST00000178664 79 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm24566-201ENSMUST00000179286 79 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm23305-201ENSMUST00000179342 79 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm26389-201ENSMUST00000179819 79 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm22130-201ENSMUST00000179979 79 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm22393-201ENSMUST00000180153 79 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm25085-201ENSMUST00000180298 79 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm8321-201ENSMUST00000181691 980 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm5350-201ENSMUST00000182057 1002 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm28356-202ENSMUST00000187566 858 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 1700021A07Rik-202ENSMUST00000187763 485 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm28864-201ENSMUST00000189251 644 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm43812-202ENSMUST00000202701 581 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm4259-201ENSMUST00000206489 758 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm19182-201ENSMUST00000207139 577 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm31522-201ENSMUST00000207942 762 ntTSL 5 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Olfr878-202ENSMUST00000212878 1064 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm40418-201ENSMUST00000218806 1013 ntTSL 5 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 AC116589.4-201ENSMUST00000222390 216 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Olfr984-201ENSMUST00000056795 945 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Olfr675-201ENSMUST00000073102 942 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Fignl1-206ENSMUST00000171080 2844 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Sytl4-201ENSMUST00000033608 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Napepld-201ENSMUST00000060899 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Gm37549-201ENSMUST00000194096 4065 ntBASIC8.58□□□□□ -1.04
Clp1Q99LI9 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Zmym5-201ENSMUST00000039812 5290 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
Clp1Q99LI9 Rffl-203ENSMUST00000074515 4973 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms