Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Muc5ac-201ENSMUST00000041924 8256 ntAPPRIS P2 TSL 5 BASIC9.61□□□□□ -0.87
RtcbQ99LF4 Vmn1r40-204ENSMUST00000228485 2689 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 C78859-201ENSMUST00000212800 5943 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm15394-201ENSMUST00000119656 1308 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Pde10a-201ENSMUST00000024647 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Tro-205ENSMUST00000151403 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Alms1-205ENSMUST00000213058 11163 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Rbbp6-202ENSMUST00000071590 5728 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Cdc6-202ENSMUST00000093937 2559 ntAPPRIS P4 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Rasgrf2-201ENSMUST00000099326 3567 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Trdv4-201ENSMUST00000103679 444 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm14489-201ENSMUST00000120868 901 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 A430048G15Rik-201ENSMUST00000149965 627 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Mir1983-201ENSMUST00000157523 132 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Crip3-206ENSMUST00000165993 735 ntTSL 2 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm6918-201ENSMUST00000167622 1222 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm26863-201ENSMUST00000181144 624 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm29664-201ENSMUST00000191125 463 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm37599-201ENSMUST00000193067 489 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm44258-201ENSMUST00000204925 301 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 AC163296.1-202ENSMUST00000218395 661 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 AC167222.1-201ENSMUST00000219379 660 ntTSL 2 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 AC163296.1-201ENSMUST00000220004 1266 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm5791-201ENSMUST00000220840 489 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 AC162934.2-201ENSMUST00000221451 249 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 AC133517.2-201ENSMUST00000226820 690 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Sdk2-201ENSMUST00000041627 11287 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Gm44937-201ENSMUST00000207705 2691 ntBASIC9.6□□□□□ -0.87
RtcbQ99LF4 Ccdc187-202ENSMUST00000217256 9411 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Bdnf-202ENSMUST00000111042 3905 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Pcdhb8-201ENSMUST00000051163 3334 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Pacsin2-202ENSMUST00000165095 3732 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Cacna1d-209ENSMUST00000224785 8041 ntAPPRIS ALT2 BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Olfr443-ps1-202ENSMUST00000204422 1617 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Rpe65-201ENSMUST00000029824 1602 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
RtcbQ99LF4 Tvp23a-201ENSMUST00000051118 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm23888-201ENSMUST00000122690 253 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm11292-201ENSMUST00000146121 1153 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm44641-201ENSMUST00000152342 323 ntTSL 3 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm25332-201ENSMUST00000158038 105 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 5330439A09Rik-201ENSMUST00000162770 1117 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Mir8120-201ENSMUST00000185035 139 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm18501-201ENSMUST00000185363 664 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm29008-201ENSMUST00000189387 298 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm36961-201ENSMUST00000191980 132 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm37072-201ENSMUST00000194570 837 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm42452-201ENSMUST00000199749 617 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm44200-201ENSMUST00000204883 662 ntTSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm45446-201ENSMUST00000209348 216 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm3942-201ENSMUST00000218495 666 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 CT025639.2-201ENSMUST00000224440 1220 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 AC121912.1-201ENSMUST00000227525 1201 ntBASIC9.59□□□□□ -0.87
RtcbQ99LF4 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Nme8-201ENSMUST00000039340 1704 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 9230112J17Rik-201ENSMUST00000216749 2333 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
RtcbQ99LF4 Elp3-203ENSMUST00000225355 2771 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Chid1-203ENSMUST00000118694 3910 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Gm8212-201ENSMUST00000166350 1404 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Kidins220-210ENSMUST00000222941 6277 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 4930546K05Rik-202ENSMUST00000216586 3539 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Acer2-201ENSMUST00000045224 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
RtcbQ99LF4 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC9.58□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms