Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Pnisr-202ENSMUST00000098238 4407 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Ptgfr-202ENSMUST00000106126 1535 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Parp8-203ENSMUST00000223949 2965 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Pcsk2os1-201ENSMUST00000126735 4233 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
Ccdc38Q8CDN8 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Cd44-208ENSMUST00000111198 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Itga2-201ENSMUST00000056117 7108 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Cacna1e-203ENSMUST00000187541 14921 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Nadk-201ENSMUST00000030939 2946 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm8084-201ENSMUST00000120807 752 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 AW495222-202ENSMUST00000149839 868 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm26784-201ENSMUST00000181666 410 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm5251-201ENSMUST00000188959 472 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm19035-202ENSMUST00000194575 959 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 D830044I16Rik-203ENSMUST00000205437 1016 ntAPPRIS P5 TSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 AC163296.1-202ENSMUST00000218395 661 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm4898-201ENSMUST00000218519 832 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 AC163296.1-201ENSMUST00000220004 1266 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 AC154687.1-201ENSMUST00000224875 677 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm42597-201ENSMUST00000196663 1544 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Unc13b-216ENSMUST00000207708 6574 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm31181-201ENSMUST00000217731 2283 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Gm38263-201ENSMUST00000195879 3059 ntBASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Add3-203ENSMUST00000111741 4520 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Ccdc38Q8CDN8 Cdc42bpa-204ENSMUST00000111117 9161 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Kcnj15-204ENSMUST00000113856 5129 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Cep290-210ENSMUST00000220346 8211 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Pik3c2g-215ENSMUST00000218528 2712 ntTSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Acsm2-207ENSMUST00000167935 6738 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm38380-201ENSMUST00000195718 2248 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 AC124581.3-201ENSMUST00000224270 1624 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Olfr702-201ENSMUST00000080899 1348 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm11969-201ENSMUST00000118848 356 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Ms4a10-203ENSMUST00000191343 862 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Ccdc38Q8CDN8 Gm17970-201ENSMUST00000192199 685 ntBASIC8.41□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms