Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm18469-201ENSMUST00000208850 439 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm45446-201ENSMUST00000209348 216 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm45756-201ENSMUST00000212491 407 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm6993-201ENSMUST00000219110 210 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Olfr13-201ENSMUST00000059512 1054 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Atp5l-ps1-201ENSMUST00000097132 312 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Mtm1-206ENSMUST00000114621 3257 ntTSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 A530017D24Rik-201ENSMUST00000101077 2315 ntTSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Olfr1324-202ENSMUST00000215270 5679 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Slc26a9-201ENSMUST00000049027 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm45805-201ENSMUST00000212695 2066 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm13821-201ENSMUST00000202029 3201 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Tnik-203ENSMUST00000159680 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Rbms2-202ENSMUST00000099139 3302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Eif2ak2-201ENSMUST00000024884 4313 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Zfp938-201ENSMUST00000041264 2035 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Keg1-201ENSMUST00000025598 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm22660-201ENSMUST00000104193 130 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm23323-201ENSMUST00000104471 133 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm11945-201ENSMUST00000120551 476 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm11343-201ENSMUST00000120579 599 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm24738-201ENSMUST00000158856 123 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Mgst2-203ENSMUST00000159554 486 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm15934-201ENSMUST00000162062 525 ntTSL 2 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm20111-201ENSMUST00000184830 319 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm17965-201ENSMUST00000193904 517 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm7392-201ENSMUST00000217815 345 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm9289-201ENSMUST00000221269 606 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 CT009556.3-201ENSMUST00000226173 513 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 AC154806.1-202ENSMUST00000227949 885 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Tmem265-201ENSMUST00000084563 1054 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 AC163040.2-201ENSMUST00000223462 3534 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm29450-201ENSMUST00000189657 1497 ntTSL 5 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gm29278-202ENSMUST00000189701 1497 ntTSL 5 BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Nyap2-201ENSMUST00000068275 4919 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
Trub1Q8C0D0 CT010514.1-201ENSMUST00000214088 2969 ntBASIC7.68□□□□□ -1.18
Trub1Q8C0D0 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Map1a-201ENSMUST00000094639 11825 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm26545-201ENSMUST00000181082 1746 ntTSL 5 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm24373-201ENSMUST00000104393 132 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Rps6-ps3-201ENSMUST00000118010 750 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm6428-201ENSMUST00000161062 345 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm27458-201ENSMUST00000185108 121 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm29008-201ENSMUST00000189387 298 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm16754-202ENSMUST00000193429 508 ntTSL 3 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm43555-201ENSMUST00000196588 310 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 AC166052.1-201ENSMUST00000217028 397 ntTSL 2 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 AC162183.1-201ENSMUST00000224843 472 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 AC161537.1-202ENSMUST00000228450 868 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Gm6767-201ENSMUST00000118650 1381 ntBASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Drp2-203ENSMUST00000113226 3499 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
Trub1Q8C0D0 Skil-202ENSMUST00000117728 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms