Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm37094-201ENSMUST00000193352 4540 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Gm42648-201ENSMUST00000200774 2505 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Vmn2r92-201ENSMUST00000169686 2583 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Gm3147-202ENSMUST00000201071 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 A430089I19Rik-201ENSMUST00000097479 1848 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Hmgcs2-201ENSMUST00000090746 3290 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Osbpl9-218ENSMUST00000162787 2408 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Plat-201ENSMUST00000033941 2525 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Igkv4-79-201ENSMUST00000103342 358 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Fabp12-203ENSMUST00000119761 548 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Gm5125-201ENSMUST00000148614 624 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Snora47-201ENSMUST00000157483 138 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Mir7220-201ENSMUST00000183978 60 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Scgb2b33-201ENSMUST00000187413 334 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Gm43091-201ENSMUST00000198157 423 ntTSL 3 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Gm32052-201ENSMUST00000212073 799 ntTSL 5 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 CT009556.1-201ENSMUST00000227282 449 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Wdr48-201ENSMUST00000036561 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Spink7-201ENSMUST00000076194 258 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Olfr519-201ENSMUST00000084752 960 ntBASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Neurod1-201ENSMUST00000041099 2729 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Trpv5-201ENSMUST00000031901 3243 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Prkd3-208ENSMUST00000168887 5884 ntAPPRIS P3 TSL 5 BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Spg11Q3UHA3 Gm21560-201ENSMUST00000168480 2066 ntAPPRIS P5 TSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 AC123705.1-201ENSMUST00000222512 2058 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Olfr738-202ENSMUST00000214320 2114 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 BC026762-201ENSMUST00000206555 2503 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Adh6-ps1-201ENSMUST00000171054 2789 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Cwc22-204ENSMUST00000111821 3388 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Zfp449-201ENSMUST00000101560 3738 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm45718-201ENSMUST00000207577 3794 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm38056-201ENSMUST00000193928 5027 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Mir193b-201ENSMUST00000103784 79 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm25724-201ENSMUST00000104531 117 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Dync1i2-204ENSMUST00000112138 2466 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm13890-201ENSMUST00000117578 390 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm16204-201ENSMUST00000117864 1897 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm9439-201ENSMUST00000119554 973 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm15644-201ENSMUST00000121764 387 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm24065-201ENSMUST00000157487 264 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Crnkl1-201ENSMUST00000001818 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm20770-201ENSMUST00000193474 694 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Igkv2-116-201ENSMUST00000199327 362 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm44245-201ENSMUST00000204304 232 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 CU074400.1-201ENSMUST00000224411 220 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Ivd-201ENSMUST00000028807 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Ppp1r7-201ENSMUST00000027494 10315 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Polr3f-201ENSMUST00000028914 4403 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Wdr76-201ENSMUST00000028676 2789 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Nsd2-201ENSMUST00000058096 4633 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Kank4os-201ENSMUST00000133455 2251 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Kalrn-212ENSMUST00000114973 5253 ntTSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm23979-201ENSMUST00000104071 128 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm15366-201ENSMUST00000118433 1019 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm14018-201ENSMUST00000119042 455 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Sms-ps-201ENSMUST00000121773 1101 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 8430436N08Rik-201ENSMUST00000129988 1077 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm8581-201ENSMUST00000188636 890 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm7115-201ENSMUST00000193706 832 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm7546-202ENSMUST00000211354 275 ntBASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 D430042O09Rik-203ENSMUST00000124223 5874 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Dubr-205ENSMUST00000191079 2105 ntTSL 2 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Zfp780b-201ENSMUST00000081618 3004 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Spg11Q3UHA3 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Spg11Q3UHA3 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Spg11Q3UHA3 Igsf9b-204ENSMUST00000214357 16144 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.29
Spg11Q3UHA3 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC6.96□□□□□ -1.29
Spg11Q3UHA3 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms