Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Smarcc1P97496 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Vegfd-201ENSMUST00000033751 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Ccnb1-202ENSMUST00000091295 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 5330417C22Rik-201ENSMUST00000048012 3321 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Slc38a1-202ENSMUST00000088454 7059 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm13415-201ENSMUST00000131886 3089 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Pank1-202ENSMUST00000112460 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 4931403G20Rik-201ENSMUST00000180861 1699 ntTSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Rtel1-203ENSMUST00000098971 4307 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 AC154747.4-203ENSMUST00000225893 1384 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm22671-201ENSMUST00000104420 134 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Xlr-203ENSMUST00000114810 984 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm13130-201ENSMUST00000119195 1166 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm14776-201ENSMUST00000121029 887 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 1700025O08Rik-201ENSMUST00000123729 456 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm13362-201ENSMUST00000137186 839 ntTSL 3 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm6047-201ENSMUST00000167221 574 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Esd-ps-201ENSMUST00000170684 847 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm24157-201ENSMUST00000175265 111 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Mir8094-201ENSMUST00000183361 117 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Mir6357-201ENSMUST00000184246 104 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm2814-201ENSMUST00000207074 1277 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm45766-201ENSMUST00000211900 478 ntTSL 3 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm18655-201ENSMUST00000214802 1090 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Olfr687-202ENSMUST00000218046 1004 ntTSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 AC127224.1-201ENSMUST00000218094 453 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm18871-201ENSMUST00000218655 745 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm34215-201ENSMUST00000221599 355 ntTSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 AC113031.6-202ENSMUST00000228468 1145 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Ccl11-201ENSMUST00000000342 1082 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Xlr-201ENSMUST00000067763 1032 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 n-R5s29-201ENSMUST00000082836 119 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Sult2a3-201ENSMUST00000098809 1018 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Mecp2-205ENSMUST00000170481 10175 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm38380-201ENSMUST00000195718 2248 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Kcnma1-203ENSMUST00000100831 3261 ntTSL 5 BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm43219-201ENSMUST00000197972 1937 ntBASIC9.56□□□□□ -0.88
Smarcc1P97496 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Uvssa-204ENSMUST00000202816 7165 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Smarcc1P97496 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Tmem245-201ENSMUST00000068792 15981 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Smarcc1P97496 9130409I23Rik-201ENSMUST00000036819 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Kbtbd3-201ENSMUST00000049648 2231 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm37199-201ENSMUST00000193881 4065 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm38200-201ENSMUST00000192083 2111 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Tma16-201ENSMUST00000026681 4328 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Bdnf-210ENSMUST00000111051 4125 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Nudt13-201ENSMUST00000022343 2494 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm12635-201ENSMUST00000117285 752 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm22533-201ENSMUST00000158821 274 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Olfr443-ps1-201ENSMUST00000163240 915 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm20452-201ENSMUST00000174686 513 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm24155-201ENSMUST00000175259 110 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm25640-201ENSMUST00000175378 125 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Ighv2-9-1-201ENSMUST00000180013 369 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm17786-201ENSMUST00000182000 427 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm19480-201ENSMUST00000185547 667 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm8004-201ENSMUST00000187782 617 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Olfr440-ps1-201ENSMUST00000204044 917 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm4585-201ENSMUST00000207218 452 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm40552-201ENSMUST00000218233 1258 ntTSL 5 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm19238-201ENSMUST00000221936 1260 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Olfr1390-201ENSMUST00000062719 936 ntAPPRIS P1 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm22504-201ENSMUST00000082963 139 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Bcorl1-201ENSMUST00000037596 7360 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC9.55□□□□□ -0.88
Smarcc1P97496 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Slx4ip-202ENSMUST00000099311 5089 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Smarcc1P97496 Gm4849-201ENSMUST00000188428 2246 ntBASIC9.55□□□□□ -0.88
Smarcc1P97496 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC9.55□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 98 ms