Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm5406-201ENSMUST00000120054 766 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm13438-201ENSMUST00000120100 573 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm12868-201ENSMUST00000143801 417 ntTSL 3 BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm15392-201ENSMUST00000152863 778 ntTSL 3 BASIC8.03□□□□□ -1.12
Shmt1P50431 1700001G01Rik-204ENSMUST00000153022 928 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm23007-201ENSMUST00000158951 177 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm7502-201ENSMUST00000169235 733 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Shmt1P50431 Lamtor3-203ENSMUST00000197064 733 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Shmt1P50431 Spink8-202ENSMUST00000198988 768 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm43040-201ENSMUST00000202399 558 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC8.03□□□□□ -1.12
Shmt1P50431 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm8077-201ENSMUST00000209221 1024 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm45446-201ENSMUST00000209348 216 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm30504-203ENSMUST00000209762 1048 ntTSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 AC132384.6-201ENSMUST00000218976 1206 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 AC139209.2-201ENSMUST00000227680 1208 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 AC161537.1-202ENSMUST00000228450 868 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Slc16a14-201ENSMUST00000027422 3207 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Cdk1-201ENSMUST00000020099 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Fam60a-209ENSMUST00000203164 2442 ntTSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Morc1-201ENSMUST00000023330 3050 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm21043-201ENSMUST00000199316 1517 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Shmt1P50431 Cd44-206ENSMUST00000111192 1305 ntAPPRIS ALT2 TSL 5 BASIC8.03□□□□□ -1.12
Shmt1P50431 Gm6350-201ENSMUST00000195099 1339 ntBASIC8.03□□□□□ -1.12
Shmt1P50431 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Shmt1P50431 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.12
Shmt1P50431 Gm38300-201ENSMUST00000194245 1870 ntBASIC8.02□□□□□ -1.12
Shmt1P50431 Zfp386-204ENSMUST00000183125 4779 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.12
Shmt1P50431 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 P2ry14-201ENSMUST00000065220 1672 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 BC085271-201ENSMUST00000191852 1487 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Mccc1os-201ENSMUST00000124469 3353 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm23323-201ENSMUST00000104471 133 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm13871-201ENSMUST00000107318 936 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm11757-201ENSMUST00000107320 936 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm11758-201ENSMUST00000107326 936 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 Ica1-202ENSMUST00000115518 1256 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm11810-201ENSMUST00000118311 333 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm8215-201ENSMUST00000120627 990 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm16330-201ENSMUST00000128324 297 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm5970-201ENSMUST00000131638 1216 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.02□□□□□ -1.13
Shmt1P50431 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 A930031H19Rik-202ENSMUST00000153810 949 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC8.02□□□□□ -1.13
Shmt1P50431 Rsph10b-204ENSMUST00000169758 702 ntTSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm17973-201ENSMUST00000174509 520 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm4308-201ENSMUST00000179735 914 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 1700022N22Rik-201ENSMUST00000180932 709 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm4301-201ENSMUST00000186197 914 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Shmt1P50431 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm4312-201ENSMUST00000190264 914 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Shmt1P50431 A930005N03Rik-201ENSMUST00000194920 1247 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm43387-201ENSMUST00000196896 1066 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm44902-201ENSMUST00000206177 805 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm45900-201ENSMUST00000211879 409 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm18226-201ENSMUST00000215261 521 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm18503-201ENSMUST00000220340 728 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 AC132881.2-201ENSMUST00000225474 709 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Shmt1P50431 Rhox11-201ENSMUST00000054147 811 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm20900-201ENSMUST00000078729 472 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 AC107453.1-201ENSMUST00000227490 3268 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 Vmn1r70-204ENSMUST00000228090 3185 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm37618-201ENSMUST00000192891 3075 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Cabyr-207ENSMUST00000191078 1642 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Entpd5-202ENSMUST00000072061 4858 ntTSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 Slc4a4-201ENSMUST00000113216 2518 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC8.02□□□□□ -1.13
Shmt1P50431 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.02□□□□□ -1.13
Shmt1P50431 4921504E06Rik-201ENSMUST00000062060 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
Shmt1P50431 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
Shmt1P50431 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.01□□□□□ -1.13
Shmt1P50431 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Svil-215ENSMUST00000210707 7633 ntAPPRIS ALT2 TSL 5 BASIC8.01□□□□□ -1.13
Shmt1P50431 Klhl13-202ENSMUST00000115313 3251 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms