Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm44014-201ENSMUST00000205150 1509 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC7.17□□□□□ -1.26
Tnfsf4P43488 Gm37618-201ENSMUST00000192891 3075 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm42969-201ENSMUST00000199858 3631 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Ccdc158-201ENSMUST00000060930 3676 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Zfp60-202ENSMUST00000108336 5896 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 AC164437.5-201ENSMUST00000227235 4414 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Npm1-203ENSMUST00000101375 966 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm25608-201ENSMUST00000104021 132 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Speer4d-202ENSMUST00000119100 857 ntTSL 2 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm12464-201ENSMUST00000121385 1016 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm11309-201ENSMUST00000127108 613 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm22949-201ENSMUST00000158562 105 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm23007-201ENSMUST00000158951 177 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm3513-201ENSMUST00000161319 637 ntTSL 3 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm8164-201ENSMUST00000169120 1192 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Mir6974-201ENSMUST00000184381 83 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm38063-201ENSMUST00000193990 342 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm37339-201ENSMUST00000194142 392 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 D13Ertd608e-202ENSMUST00000195797 704 ntAPPRIS P5 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm44471-201ENSMUST00000197963 100 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm7285-201ENSMUST00000198801 580 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm40319-201ENSMUST00000199785 481 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm9354-201ENSMUST00000209075 468 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm6909-201ENSMUST00000209825 989 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm45782-201ENSMUST00000212670 366 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm40853-201ENSMUST00000221342 582 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm2915-201ENSMUST00000222565 787 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 AL591207.2-201ENSMUST00000222991 337 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm9255-201ENSMUST00000223225 581 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Cthrc1-204ENSMUST00000226433 596 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Med21-201ENSMUST00000032429 814 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm8836-201ENSMUST00000198196 1348 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Ube4a-204ENSMUST00000138559 3374 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Mir99ahg-208ENSMUST00000182748 3151 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Zfp560-201ENSMUST00000068079 4751 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Gm37786-201ENSMUST00000191714 3225 ntBASIC7.16□□□□□ -1.26
Tnfsf4P43488 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
Tnfsf4P43488 Parp11-203ENSMUST00000112193 1725 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm26569-201ENSMUST00000181968 1789 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm38147-201ENSMUST00000192397 1798 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm6823-201ENSMUST00000120791 1839 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Cops2-202ENSMUST00000110462 1853 ntTSL 5 BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm42898-201ENSMUST00000200370 3073 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Trmt10b-201ENSMUST00000044673 2064 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Olfr1254-203ENSMUST00000216587 2183 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.26
Tnfsf4P43488 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Cps1-201ENSMUST00000027144 5555 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm44021-201ENSMUST00000203055 3516 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm22022-201ENSMUST00000104355 127 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Prh1-202ENSMUST00000111972 870 ntAPPRIS P2 TSL 5 BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Clec4n-202ENSMUST00000112554 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm13160-201ENSMUST00000118441 627 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm15836-201ENSMUST00000119952 793 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm8084-201ENSMUST00000120807 752 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Defa33-201ENSMUST00000120874 426 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm13776-201ENSMUST00000122236 1261 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm11188-201ENSMUST00000122382 388 ntBASIC7.15□□□□□ -1.26
Tnfsf4P43488 Bcas1os2-201ENSMUST00000131931 1174 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm11948-201ENSMUST00000142322 539 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 1700025N21Rik-201ENSMUST00000160997 686 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Vwc2l-204ENSMUST00000162182 1195 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Defa2-201ENSMUST00000170275 426 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Gm38143-201ENSMUST00000191751 644 ntTSL 3 BASIC7.15□□□□□ -1.26
Tnfsf4P43488 Wars2-205ENSMUST00000198044 403 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms