Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 AC153143.2-201ENSMUST00000220999 1804 ntBASIC7.64□□□□□ -1.19
HttP42859 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Mns1-201ENSMUST00000034746 5250 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC7.64□□□□□ -1.19
HttP42859 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
HttP42859 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC7.64□□□□□ -1.19
HttP42859 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.64□□□□□ -1.19
HttP42859 Mir6952-201ENSMUST00000185092 61 ntBASIC7.64□□□□□ -1.19
HttP42859 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC7.64□□□□□ -1.19
HttP42859 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.64□□□□□ -1.19
HttP42859 Col28a1-201ENSMUST00000115537 4230 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Eif4e2-207ENSMUST00000113235 3473 ntTSL 5 BASIC7.64□□□□□ -1.19
HttP42859 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC7.64□□□□□ -1.19
HttP42859 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC7.64□□□□□ -1.19
HttP42859 Mrps5-201ENSMUST00000028852 4481 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
HttP42859 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Vmn1r176-202ENSMUST00000226319 2930 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
HttP42859 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm15203-201ENSMUST00000117668 455 ntBASIC7.63□□□□□ -1.19
HttP42859 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
HttP42859 Gm12279-201ENSMUST00000142533 294 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC7.63□□□□□ -1.19
HttP42859 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Snora44-201ENSMUST00000082670 129 ntBASIC7.63□□□□□ -1.19
HttP42859 Snapc4-202ENSMUST00000114115 4368 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Sec22c-201ENSMUST00000078547 5713 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 2610203C20Rik-215ENSMUST00000212373 1574 ntTSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Mab21l3-201ENSMUST00000061831 3558 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm43982-201ENSMUST00000204995 1829 ntBASIC7.63□□□□□ -1.19
HttP42859 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm14893-201ENSMUST00000117904 282 ntBASIC7.63□□□□□ -1.19
HttP42859 Gm13983-201ENSMUST00000118018 865 ntBASIC7.63□□□□□ -1.19
HttP42859 Gm14805-201ENSMUST00000120172 340 ntBASIC7.63□□□□□ -1.19
HttP42859 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Gm43215-201ENSMUST00000199108 252 ntBASIC7.63□□□□□ -1.19
HttP42859 Gm5990-201ENSMUST00000203126 746 ntBASIC7.63□□□□□ -1.19
HttP42859 Gm18467-201ENSMUST00000208805 434 ntBASIC7.63□□□□□ -1.19
HttP42859 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.63□□□□□ -1.19
HttP42859 AC154627.1-201ENSMUST00000228799 1286 ntBASIC7.63□□□□□ -1.19
HttP42859 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Bpifa2-201ENSMUST00000048103 978 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Zfp40-201ENSMUST00000037057 4103 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm37960-201ENSMUST00000192402 1897 ntBASIC7.63□□□□□ -1.19
HttP42859 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Mir92b-201ENSMUST00000102300 83 ntBASIC7.63□□□□□ -1.19
HttP42859 Gm14733-201ENSMUST00000117680 133 ntBASIC7.63□□□□□ -1.19
HttP42859 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Gm26323-201ENSMUST00000157743 175 ntBASIC7.63□□□□□ -1.19
HttP42859 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Olr1-203ENSMUST00000182784 570 ntAPPRIS ALT2 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 Gm9745-202ENSMUST00000187196 858 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
HttP42859 AC147782.1-201ENSMUST00000219169 475 ntBASIC7.63□□□□□ -1.19
HttP42859 AC155941.1-201ENSMUST00000220223 529 ntBASIC7.63□□□□□ -1.19
HttP42859 Gm7441-201ENSMUST00000220697 1074 ntBASIC7.63□□□□□ -1.19
HttP42859 AC156790.1-201ENSMUST00000226572 559 ntBASIC7.63□□□□□ -1.19
HttP42859 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
HttP42859 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC7.62□□□□□ -1.19
HttP42859 Ambn-201ENSMUST00000031226 1854 ntAPPRIS P3 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 A830010M20Rik-201ENSMUST00000060553 2439 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC7.62□□□□□ -1.19
HttP42859 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Fgf13-202ENSMUST00000119306 2091 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Pfkfb2-211ENSMUST00000189534 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.62□□□□□ -1.19
HttP42859 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC7.62□□□□□ -1.19
HttP42859 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
HttP42859 Abcc4-202ENSMUST00000166646 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC7.62□□□□□ -1.19
HttP42859 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
HttP42859 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms