Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm17552-201ENSMUST00000181211 3877 ntTSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC8.82□□□□□ -1
Traf1P39428 Nlrc5-201ENSMUST00000053085 6945 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Gm36823-203ENSMUST00000199408 1792 ntTSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Gm23323-201ENSMUST00000104471 133 ntBASIC8.82□□□□□ -1
Traf1P39428 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC8.82□□□□□ -1
Traf1P39428 AC122263.2-201ENSMUST00000145909 586 ntTSL 3 BASIC8.82□□□□□ -1
Traf1P39428 Gm22915-201ENSMUST00000157615 136 ntBASIC8.82□□□□□ -1
Traf1P39428 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Gm27458-201ENSMUST00000185108 121 ntBASIC8.82□□□□□ -1
Traf1P39428 1700016D06Rik-202ENSMUST00000190741 604 ntTSL 2 BASIC8.82□□□□□ -1
Traf1P39428 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC8.82□□□□□ -1
Traf1P39428 Gm7943-201ENSMUST00000212078 1034 ntBASIC8.82□□□□□ -1
Traf1P39428 Gm32899-201ENSMUST00000219694 207 ntBASIC8.82□□□□□ -1
Traf1P39428 AC118006.3-201ENSMUST00000223948 1176 ntBASIC8.82□□□□□ -1
Traf1P39428 AC165154.2-201ENSMUST00000227310 336 ntBASIC8.82□□□□□ -1
Traf1P39428 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Rbp7-201ENSMUST00000030848 619 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC8.82□□□□□ -1
Traf1P39428 Zfp455-202ENSMUST00000120861 2712 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Traf1P39428 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Traf1P39428 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.82□□□□□ -1
Traf1P39428 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Olfr1426-204ENSMUST00000219005 2507 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Traf1P39428 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Cfap161-202ENSMUST00000119134 2868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC8.82□□□□□ -1
Traf1P39428 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC8.82□□□□□ -1
Traf1P39428 Gm37326-201ENSMUST00000192828 3071 ntBASIC8.82□□□□□ -1
Traf1P39428 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Eapp-206ENSMUST00000163433 2658 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Itgb6-202ENSMUST00000059888 4806 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Traf1P39428 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Traf1P39428 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Gm43181-201ENSMUST00000197001 2072 ntBASIC8.81□□□□□ -1
Traf1P39428 Akap7-201ENSMUST00000041984 2092 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Arfgef1-201ENSMUST00000088615 6978 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Traf1P39428 Igkv9-123-201ENSMUST00000103313 377 ntAPPRIS P1 BASIC8.81□□□□□ -1
Traf1P39428 Gm14480-201ENSMUST00000118521 433 ntBASIC8.81□□□□□ -1
Traf1P39428 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC8.81□□□□□ -1
Traf1P39428 Mir1981-201ENSMUST00000157934 82 ntBASIC8.81□□□□□ -1
Traf1P39428 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Gpx2-ps1-201ENSMUST00000160622 571 ntBASIC8.81□□□□□ -1
Traf1P39428 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC8.81□□□□□ -1
Traf1P39428 Gm17973-201ENSMUST00000174509 520 ntBASIC8.81□□□□□ -1
Traf1P39428 Gm22132-201ENSMUST00000175316 100 ntBASIC8.81□□□□□ -1
Traf1P39428 Gm26959-201ENSMUST00000182376 978 ntBASIC8.81□□□□□ -1
Traf1P39428 Gm28142-201ENSMUST00000186899 698 ntBASIC8.81□□□□□ -1
Traf1P39428 Gm20917-202ENSMUST00000188706 1224 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Gm45202-201ENSMUST00000205955 332 ntTSL 3 BASIC8.81□□□□□ -1
Traf1P39428 Gm9249-201ENSMUST00000221420 578 ntBASIC8.81□□□□□ -1
Traf1P39428 AC166822.1-201ENSMUST00000227667 636 ntBASIC8.81□□□□□ -1
Traf1P39428 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.81□□□□□ -1
Traf1P39428 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Traf1P39428 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Traf1P39428 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Traf1P39428 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC8.81□□□□□ -1
Traf1P39428 Gm37151-201ENSMUST00000194631 5007 ntBASIC8.81□□□□□ -1
Traf1P39428 AC107740.1-201ENSMUST00000216972 2401 ntTSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Pkib-202ENSMUST00000075992 5317 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Traf1P39428 Kdm4c-201ENSMUST00000030102 4196 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Traf1P39428 AC168056.4-201ENSMUST00000223835 2567 ntBASIC8.8□□□□□ -1
Traf1P39428 Epc1-203ENSMUST00000115870 3817 ntTSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Mapk10-202ENSMUST00000112846 2617 ntTSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Traf1P39428 Gm23527-201ENSMUST00000104570 130 ntBASIC8.8□□□□□ -1
Traf1P39428 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Uqcrq-202ENSMUST00000109019 504 ntTSL 2 BASIC8.8□□□□□ -1
Traf1P39428 Mobp-203ENSMUST00000111627 481 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Traf1P39428 Defa-ps7-201ENSMUST00000117139 168 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm6877-201ENSMUST00000119347 1101 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm13224-201ENSMUST00000119586 94 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm13622-201ENSMUST00000120658 433 ntBASIC8.8□□□□□ -1
Traf1P39428 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC8.8□□□□□ -1
Traf1P39428 Gm9697-201ENSMUST00000147052 997 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm14009-201ENSMUST00000152439 656 ntTSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Gm22206-201ENSMUST00000158612 116 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm5445-201ENSMUST00000180224 480 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC8.8□□□□□ -1
Traf1P39428 Mir7058-201ENSMUST00000184637 75 ntBASIC8.8□□□□□ -1
Traf1P39428 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC8.8□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 96.8 ms