Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Gm29759-201ENSMUST00000205860 327 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 Gm31663-202ENSMUST00000208481 1190 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm30132-202ENSMUST00000212825 819 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a2P25318 AC134859.1-201ENSMUST00000214085 721 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a2P25318 Ldah-206ENSMUST00000218086 1159 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 AC192091.1-201ENSMUST00000218668 439 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a2P25318 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC6.23□□□□□ -1.41
Col8a2P25318 4930474N09Rik-201ENSMUST00000223511 1176 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 AC154747.4-201ENSMUST00000224802 903 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 AC140451.1-201ENSMUST00000227984 737 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 Reg1-201ENSMUST00000079926 769 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm28651-202ENSMUST00000227968 2693 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm20560-201ENSMUST00000204577 3513 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Olfr6-201ENSMUST00000040983 6834 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm10601-201ENSMUST00000120436 1422 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC6.23□□□□□ -1.41
Col8a2P25318 St3gal6-202ENSMUST00000114358 2264 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm17638-201ENSMUST00000181255 4343 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Col8a2P25318 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm28819-202ENSMUST00000187416 1335 ntTSL 5 BASIC6.23□□□□□ -1.41
Col8a2P25318 Pus7-204ENSMUST00000131992 3645 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Col8a2P25318 Xlr3a-202ENSMUST00000114524 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm37382-201ENSMUST00000193032 1596 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.23□□□□□ -1.41
Col8a2P25318 Zfp592-201ENSMUST00000107353 7297 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Col8a2P25318 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm42771-201ENSMUST00000198342 2486 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Prdm16-206ENSMUST00000105638 8601 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Olfr399-202ENSMUST00000215915 1796 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Tardbp-205ENSMUST00000105700 923 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Apoa2-202ENSMUST00000111319 458 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm6491-201ENSMUST00000118273 990 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm11926-201ENSMUST00000118520 430 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm11371-201ENSMUST00000120294 385 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm12459-201ENSMUST00000120659 356 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm4887-201ENSMUST00000122230 1053 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm25780-201ENSMUST00000122528 253 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC6.22□□□□□ -1.41
Col8a2P25318 Plxna4os3-202ENSMUST00000143328 277 ntTSL 3 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm7418-201ENSMUST00000162120 801 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm5445-201ENSMUST00000180224 480 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm21181-201ENSMUST00000186249 330 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm43122-201ENSMUST00000201752 354 ntTSL 3 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm5723-201ENSMUST00000203096 432 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm18559-201ENSMUST00000208249 604 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC6.22□□□□□ -1.41
Col8a2P25318 AC238940.2-201ENSMUST00000224202 330 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 AC165287.1-201ENSMUST00000224985 178 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm25926-201ENSMUST00000082899 160 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Emsy-201ENSMUST00000038359 3564 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm7945-201ENSMUST00000164948 1428 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Col8a2P25318 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 B020004J07Rik-202ENSMUST00000106919 1976 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Col8a2P25318 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Col8a2P25318 Gm37663-201ENSMUST00000191887 2299 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Gm43519-201ENSMUST00000197239 1872 ntBASIC6.22□□□□□ -1.41
Col8a2P25318 Asxl2-202ENSMUST00000111215 8887 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Col8a2P25318 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a2P25318 Mfap1b-201ENSMUST00000056732 3362 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a2P25318 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a2P25318 Sulf1-201ENSMUST00000088585 4630 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a2P25318 Ankrd55-203ENSMUST00000165593 2749 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.41
Col8a2P25318 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a2P25318 Cflar-205ENSMUST00000114313 6572 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a2P25318 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
Col8a2P25318 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.21□□□□□ -1.41
Col8a2P25318 Gm31267-201ENSMUST00000218941 1397 ntTSL 3 BASIC6.21□□□□□ -1.41
Col8a2P25318 AC154522.1-201ENSMUST00000224647 1903 ntBASIC6.21□□□□□ -1.41
Col8a2P25318 Vmn1r4-202ENSMUST00000176838 2235 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Elf5-201ENSMUST00000028609 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Col8a2P25318 Gm25546-201ENSMUST00000103977 132 ntBASIC6.21□□□□□ -1.42
Col8a2P25318 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 98.1 ms