Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Kif9-201ENSMUST00000061155 2956 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd8P23463 AY702103-202ENSMUST00000180996 5876 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Hoxd8P23463 Gm7389-201ENSMUST00000181162 2884 ntBASIC8.65□□□□□ -1.03
Hoxd8P23463 AC122397.1-201ENSMUST00000228650 2819 ntBASIC8.65□□□□□ -1.03
Hoxd8P23463 Atg4a-201ENSMUST00000112971 2202 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd8P23463 Trip11-201ENSMUST00000021605 9873 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd8P23463 Fn3k-203ENSMUST00000103014 3841 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd8P23463 Prr14-202ENSMUST00000106292 2175 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.03
Hoxd8P23463 Brdt-202ENSMUST00000112677 1607 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd8P23463 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd8P23463 Epn2-202ENSMUST00000108711 4287 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Hoxd8P23463 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd8P23463 Mcf2-202ENSMUST00000063507 4227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Hoxd8P23463 Pcdh15-231ENSMUST00000177107 5696 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.03
Hoxd8P23463 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Retsat-201ENSMUST00000070597 3027 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Bag6-211ENSMUST00000173550 3536 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Zfp260-201ENSMUST00000050735 4006 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Zwilch-201ENSMUST00000122091 2957 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 9330121K16Rik-201ENSMUST00000211464 3886 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Epas1-201ENSMUST00000024954 5309 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Sub1-201ENSMUST00000022816 3372 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Taok3-210ENSMUST00000179276 4302 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Foxp3-204ENSMUST00000115740 3832 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Xntrpc-202ENSMUST00000094129 4150 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Phc1-202ENSMUST00000081849 3683 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Apol11b-202ENSMUST00000180949 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Cass4-203ENSMUST00000109136 2702 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gpr83-201ENSMUST00000034408 3586 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm45292-201ENSMUST00000211232 2207 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Kif1b-203ENSMUST00000060537 10233 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm45821-201ENSMUST00000211967 1757 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Pla2g2c-202ENSMUST00000105808 3448 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm14621-201ENSMUST00000117709 689 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm15574-201ENSMUST00000119937 405 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm13633-201ENSMUST00000120668 898 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm15009-201ENSMUST00000121387 322 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Mup-ps22-201ENSMUST00000121611 243 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Mir1962-201ENSMUST00000157516 121 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm6650-201ENSMUST00000166710 614 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm27001-201ENSMUST00000182252 936 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28489-201ENSMUST00000186655 316 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm29126-201ENSMUST00000188686 151 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm37771-201ENSMUST00000193121 265 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm36996-201ENSMUST00000194466 250 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm35212-201ENSMUST00000196672 606 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm18980-201ENSMUST00000199098 1079 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm42952-206ENSMUST00000199324 506 ntTSL 3 BASIC8.64□□□□□ -1.03
Hoxd8P23463 2900060B14Rik-201ENSMUST00000203191 616 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm44786-201ENSMUST00000208165 1008 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm2225-201ENSMUST00000209570 377 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 AC127254.1-201ENSMUST00000216563 524 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 CT573422.1-201ENSMUST00000216655 405 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm34574-202ENSMUST00000219433 1108 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 AC132237.3-201ENSMUST00000220867 549 ntTSL 2 BASIC8.64□□□□□ -1.03
Hoxd8P23463 AC107453.2-201ENSMUST00000227714 655 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 AC118250.1-201ENSMUST00000228569 875 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 4930504O13Rik-201ENSMUST00000064614 549 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Arl9-201ENSMUST00000071199 402 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm24046-201ENSMUST00000083111 165 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Vmn1r194-201ENSMUST00000091737 891 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Olfr1303-201ENSMUST00000099609 939 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Olfr376-202ENSMUST00000120401 3342 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC8.64□□□□□ -1.03
Hoxd8P23463 Gm44550-201ENSMUST00000207311 2058 ntBASIC8.64□□□□□ -1.03
Hoxd8P23463 D130040H23Rik-204ENSMUST00000212549 2002 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Hoxd8P23463 Ndrg3-203ENSMUST00000109558 4023 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms