Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Allc-201ENSMUST00000020965 1500 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Samd3-206ENSMUST00000220219 1744 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Gm43876-201ENSMUST00000203831 3229 ntBASIC6□□□□□ -1.45
Sdc1P18828 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Gm44661-201ENSMUST00000208830 3503 ntBASIC6□□□□□ -1.45
Sdc1P18828 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Gm13047-201ENSMUST00000117116 815 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm13255-201ENSMUST00000117255 547 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm16221-201ENSMUST00000117331 393 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm12206-201ENSMUST00000119795 601 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm15815-201ENSMUST00000120569 255 ntBASIC6□□□□□ -1.45
Sdc1P18828 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Gm25178-201ENSMUST00000122633 325 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm15873-201ENSMUST00000123390 761 ntTSL 3 BASIC6□□□□□ -1.45
Sdc1P18828 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 4930562A09Rik-201ENSMUST00000153818 734 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 4931403E22Rik-201ENSMUST00000177048 668 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm7577-201ENSMUST00000182543 982 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm7804-201ENSMUST00000192784 738 ntTSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 A430073D23Rik-201ENSMUST00000196262 665 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Gm21040-201ENSMUST00000199493 1132 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm21461-201ENSMUST00000200382 863 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm38840-201ENSMUST00000204716 843 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm42402-201ENSMUST00000208341 1054 ntBASIC6□□□□□ -1.45
Sdc1P18828 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 AC108846.4-201ENSMUST00000216783 341 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm2089-201ENSMUST00000218294 479 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm4178-201ENSMUST00000218307 649 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm18114-201ENSMUST00000221780 523 ntBASIC6□□□□□ -1.45
Sdc1P18828 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Sdc1P18828 AC211878.7-201ENSMUST00000222851 661 ntBASIC6□□□□□ -1.45
Sdc1P18828 AC139130.1-201ENSMUST00000228281 620 ntBASIC6□□□□□ -1.45
Sdc1P18828 Hist1h1t-201ENSMUST00000041052 912 ntAPPRIS P1 BASIC6□□□□□ -1.45
Sdc1P18828 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Mrps36-ps1-201ENSMUST00000061311 306 ntBASIC6□□□□□ -1.45
Sdc1P18828 Pecam1-201ENSMUST00000068021 2977 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
Sdc1P18828 Gm26132-201ENSMUST00000083166 148 ntBASIC6□□□□□ -1.45
Sdc1P18828 Gm22053-201ENSMUST00000083394 200 ntBASIC6□□□□□ -1.45
Sdc1P18828 Mir187-201ENSMUST00000083598 61 ntBASIC6□□□□□ -1.45
Sdc1P18828 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Snora57-201ENSMUST00000093658 148 ntBASIC6□□□□□ -1.45
Sdc1P18828 Prokr2-204ENSMUST00000142766 3932 ntTSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Gm43158-201ENSMUST00000198484 1555 ntBASIC6□□□□□ -1.45
Sdc1P18828 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
Sdc1P18828 Olfr60-205ENSMUST00000216027 3300 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Tnik-202ENSMUST00000159308 3831 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC6□□□□□ -1.45
Sdc1P18828 Gm42766-201ENSMUST00000200233 1332 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 9230102K24Rik-201ENSMUST00000219459 1303 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm44231-201ENSMUST00000204106 4075 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Acp2-201ENSMUST00000002172 4656 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 AC132467.1-201ENSMUST00000226498 1845 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Hibch-201ENSMUST00000044478 1830 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Sdc1P18828 AC154576.1-202ENSMUST00000223966 3320 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm4073-201ENSMUST00000176792 3500 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Olfr615-203ENSMUST00000215673 3469 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm43229-201ENSMUST00000201812 1850 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm21781-201ENSMUST00000178920 4838 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Pnlip-201ENSMUST00000057270 1485 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm26831-201ENSMUST00000181458 1380 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Nppb-201ENSMUST00000103231 781 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
Sdc1P18828 Tnni2-201ENSMUST00000105971 732 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
Sdc1P18828 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC5.99□□□□□ -1.45
Sdc1P18828 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm13828-201ENSMUST00000122278 363 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm12780-201ENSMUST00000122458 645 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm11629-201ENSMUST00000123784 384 ntTSL 3 BASIC5.99□□□□□ -1.45
Sdc1P18828 Piga-204ENSMUST00000133813 1086 ntTSL 5 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm13833-201ENSMUST00000146766 719 ntTSL 3 BASIC5.99□□□□□ -1.45
Sdc1P18828 9530046B11Rik-201ENSMUST00000149413 1157 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm23675-201ENSMUST00000157311 125 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Mir1964-201ENSMUST00000158514 83 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Btnl5-ps-202ENSMUST00000173333 461 ntTSL 2 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm22461-201ENSMUST00000175272 70 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm20702-201ENSMUST00000176181 460 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm27483-201ENSMUST00000184983 71 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm18752-201ENSMUST00000192876 608 ntBASIC5.99□□□□□ -1.45
Sdc1P18828 Gm37218-201ENSMUST00000192917 390 ntTSL 2 BASIC5.99□□□□□ -1.45
Sdc1P18828 Gm30771-201ENSMUST00000205683 737 ntTSL 3 BASIC5.99□□□□□ -1.45
Sdc1P18828 Ccdc153-206ENSMUST00000216632 800 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 250.7 ms