Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Akap1-202ENSMUST00000107903 3721 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 C330007P06Rik-202ENSMUST00000115248 3340 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Depdc5-202ENSMUST00000087897 8216 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 4933406J09Rik-201ENSMUST00000203352 1505 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Rrm1-201ENSMUST00000033283 3997 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm36993-201ENSMUST00000192983 2980 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC8.75□□□□□ -1.01
Col1a1P11087 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm22927-201ENSMUST00000104268 131 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm11585-201ENSMUST00000120901 569 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm24781-201ENSMUST00000157636 117 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 Gm21614-201ENSMUST00000183260 1005 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm7019-201ENSMUST00000194122 369 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 Gm4860-201ENSMUST00000200368 454 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC8.75□□□□□ -1.01
Col1a1P11087 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC8.75□□□□□ -1.01
Col1a1P11087 CT485606.3-201ENSMUST00000215810 624 ntTSL 3 BASIC8.75□□□□□ -1.01
Col1a1P11087 AC124184.1-201ENSMUST00000218167 283 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 Gm46424-201ENSMUST00000221567 168 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 AV026068-219ENSMUST00000224148 933 ntBASIC8.75□□□□□ -1.01
Col1a1P11087 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
Col1a1P11087 Pla2r1-201ENSMUST00000112525 7112 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Cxcr6-201ENSMUST00000049810 1897 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Gm16427-203ENSMUST00000201432 2042 ntAPPRIS P5 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Col1a1P11087 Tardbp-202ENSMUST00000084125 7477 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Trim38-203ENSMUST00000226039 1999 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col1a1P11087 Ndufb8-209ENSMUST00000171415 2142 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm10307-201ENSMUST00000189839 1337 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Ctnnd1-221ENSMUST00000111695 6344 ntTSL 5 BASIC8.74□□□□□ -1.01
Col1a1P11087 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm37200-201ENSMUST00000193689 2172 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Slc22a26-202ENSMUST00000120522 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Garnl3-202ENSMUST00000102810 3578 ntAPPRIS P2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm14864-201ENSMUST00000116164 1087 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm7613-201ENSMUST00000139070 487 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Gm22223-201ENSMUST00000157360 125 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Gm24011-201ENSMUST00000157732 268 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 AU015336-201ENSMUST00000159040 849 ntTSL 5 BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm9286-201ENSMUST00000173586 508 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm10136-201ENSMUST00000183196 435 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Gm20128-201ENSMUST00000196189 417 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm18562-201ENSMUST00000209949 915 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC8.74□□□□□ -1.01
Col1a1P11087 AC153847.1-201ENSMUST00000214524 353 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 AC159542.1-201ENSMUST00000218201 450 ntTSL 3 BASIC8.74□□□□□ -1.01
Col1a1P11087 AC132587.1-201ENSMUST00000220562 166 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Gm18960-201ENSMUST00000222962 713 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Ube2c-202ENSMUST00000088248 967 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Col1a1P11087 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Zc2hc1c-201ENSMUST00000059341 4482 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm44437-201ENSMUST00000203832 4038 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
Col1a1P11087 Pcdhb11-201ENSMUST00000053073 4419 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
Col1a1P11087 Tns1-208ENSMUST00000187584 9916 ntAPPRIS ALT2 TSL 5 BASIC8.74□□□□□ -1.01
Col1a1P11087 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm15127-201ENSMUST00000101186 2026 ntAPPRIS P2 TSL 5 BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm15091-201ENSMUST00000112740 2026 ntAPPRIS P1 TSL 5 BASIC8.74□□□□□ -1.01
Col1a1P11087 Gm15109-201ENSMUST00000133085 2026 ntBASIC8.74□□□□□ -1.01
Col1a1P11087 Gm5454-201ENSMUST00000052030 1453 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm43323-201ENSMUST00000202328 4258 ntBASIC8.73□□□□□ -1.01
Col1a1P11087 Ttc30a1-201ENSMUST00000099994 3721 ntAPPRIS P1 BASIC8.73□□□□□ -1.01
Col1a1P11087 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Cenpl-201ENSMUST00000028035 4883 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 4930447C04Rik-208ENSMUST00000136075 1970 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Dock1-201ENSMUST00000084488 6807 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Ccdc180-204ENSMUST00000178561 5081 ntAPPRIS P1 TSL 5 BASIC8.73□□□□□ -1.01
Col1a1P11087 Pecam1-203ENSMUST00000103069 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.73□□□□□ -1.01
Col1a1P11087 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC8.73□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms