Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Ucp2-202ENSMUST00000126534 3988 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc180J3QNE4 Arsj-201ENSMUST00000093976 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc180J3QNE4 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Ccdc180J3QNE4 Gm42930-201ENSMUST00000200872 3260 ntBASIC13.58□□□□□ -0.23
Ccdc180J3QNE4 Gm20236-201ENSMUST00000193037 4540 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm37094-201ENSMUST00000193352 4540 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Ikbkg-202ENSMUST00000064407 4530 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Vmn1r44-213ENSMUST00000228700 2004 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm9585-201ENSMUST00000219681 1404 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Diaph1-203ENSMUST00000115629 5416 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Smim8-205ENSMUST00000108134 782 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm14847-201ENSMUST00000121978 519 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm17212-201ENSMUST00000166666 259 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Prepl-202ENSMUST00000171795 3830 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm42723-201ENSMUST00000199966 1044 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm44227-201ENSMUST00000203576 241 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 9130015A21Rik-202ENSMUST00000222153 837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 CT030170.6-203ENSMUST00000222523 1295 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 AC115304.1-202ENSMUST00000226850 837 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 n-R5s29-201ENSMUST00000082836 119 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm5903-201ENSMUST00000121836 2325 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Lmod1-201ENSMUST00000059352 3948 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm19028-201ENSMUST00000189614 1873 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Gm37084-201ENSMUST00000191688 5898 ntBASIC13.58□□□□□ -0.24
Ccdc180J3QNE4 Pex7-201ENSMUST00000020182 8099 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm20767-202ENSMUST00000225683 1427 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm45175-201ENSMUST00000208295 1375 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 AC166574.1-201ENSMUST00000226916 1309 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm26144-201ENSMUST00000104475 132 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Prelid3b-202ENSMUST00000117442 683 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm12175-201ENSMUST00000122081 345 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm15736-201ENSMUST00000141710 420 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm24057-201ENSMUST00000158616 302 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm6507-201ENSMUST00000159767 652 ntTSL 3 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 AV026068-205ENSMUST00000186386 762 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm43656-201ENSMUST00000197882 434 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 AC079644.2-201ENSMUST00000220581 322 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Ppfibp2-202ENSMUST00000098134 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm37139-201ENSMUST00000192134 4419 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Katnal1-201ENSMUST00000047257 6157 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm31152-201ENSMUST00000210319 2171 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Smpd4-203ENSMUST00000090159 4565 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Gm38300-201ENSMUST00000194245 1870 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 AC161247.1-201ENSMUST00000217744 2295 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Mybpc2-201ENSMUST00000165208 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Olfr554-202ENSMUST00000214841 2659 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 CT030185.2-201ENSMUST00000222614 1310 ntBASIC13.57□□□□□ -0.24
Ccdc180J3QNE4 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Fto-202ENSMUST00000125471 3887 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm5255-201ENSMUST00000120125 642 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm15596-201ENSMUST00000121139 784 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm11257-201ENSMUST00000121313 315 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 1700086P04Rik-201ENSMUST00000149472 1009 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 AC124778.1-201ENSMUST00000216013 162 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 CT010453.2-201ENSMUST00000227005 483 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 CT030238.3-201ENSMUST00000227352 875 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Emc2-201ENSMUST00000022962 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Insig2-202ENSMUST00000071064 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Slxl1-201ENSMUST00000088740 730 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Etohd2-201ENSMUST00000162450 4862 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Zfp804b-201ENSMUST00000164784 3924 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Pdgfra-201ENSMUST00000000476 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 2610203C20Rik-204ENSMUST00000181214 3525 ntTSL 5 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Ahi1-202ENSMUST00000163505 2067 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm38331-201ENSMUST00000195719 2671 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Lrrc15-201ENSMUST00000064606 5310 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm6327-201ENSMUST00000171185 1335 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm26645-201ENSMUST00000181076 1316 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm13224-201ENSMUST00000119586 94 ntBASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Ccdc180J3QNE4 Gm20128-201ENSMUST00000196189 417 ntBASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms