Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Gm8127-201ENSMUST00000163655 1427 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm6491-201ENSMUST00000118273 990 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm11945-201ENSMUST00000120551 476 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm15160-201ENSMUST00000120553 907 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm11383-201ENSMUST00000121346 807 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm5611-201ENSMUST00000164523 852 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm6610-201ENSMUST00000186324 358 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm37585-201ENSMUST00000195440 280 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm44096-201ENSMUST00000203171 504 ntTSL 2 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 BC024386-202ENSMUST00000209496 851 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Olfr1345-ps1-201ENSMUST00000210627 244 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Akr1c21-201ENSMUST00000021628 1207 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 AC152819.1-201ENSMUST00000220435 871 ntTSL 5 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 AC055772.1-201ENSMUST00000222646 395 ntTSL 3 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 AC154461.4-201ENSMUST00000224878 468 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 AC125539.1-201ENSMUST00000227423 622 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Defa35-201ENSMUST00000078121 398 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Rpl31-ps20-201ENSMUST00000080982 378 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Snora9-201ENSMUST00000082579 133 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm43422-201ENSMUST00000199780 3571 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Zfp661-201ENSMUST00000077422 2765 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm6787-201ENSMUST00000123120 1454 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Tdrkh-201ENSMUST00000045245 2642 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Gm42866-201ENSMUST00000195919 3304 ntBASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Prr15l-204ENSMUST00000107636 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Upk3aQ9JKX8 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Upk3aQ9JKX8 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.25
Upk3aQ9JKX8 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC7.21□□□□□ -1.25
Upk3aQ9JKX8 Gm18632-201ENSMUST00000222597 2087 ntBASIC7.21□□□□□ -1.25
Upk3aQ9JKX8 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Upk3aQ9JKX8 Sox6-202ENSMUST00000106612 8193 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.25
Upk3aQ9JKX8 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm23701-201ENSMUST00000103893 110 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm8644-201ENSMUST00000118619 596 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm13988-201ENSMUST00000119363 288 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Ccdc142os-201ENSMUST00000125657 891 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm13421-202ENSMUST00000142511 803 ntTSL 3 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm15904-201ENSMUST00000154515 487 ntTSL 3 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Ighv13-2-202ENSMUST00000183954 302 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Mir7029-201ENSMUST00000184777 61 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm42823-201ENSMUST00000197975 256 ntTSL 3 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm3103-201ENSMUST00000198073 752 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm42558-201ENSMUST00000200982 265 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Lmo3-208ENSMUST00000203435 572 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm44192-201ENSMUST00000204195 556 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm45432-201ENSMUST00000210391 416 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm36435-201ENSMUST00000213341 1178 ntTSL 5 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 AC139209.2-201ENSMUST00000227680 1208 ntBASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 B230118H07Rik-201ENSMUST00000090513 969 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upk3aQ9JKX8 Gm12187-201ENSMUST00000119584 1375 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Tecta-201ENSMUST00000042190 7338 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Slc7a2-204ENSMUST00000118432 3681 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm43533-201ENSMUST00000202933 2936 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Chd8-201ENSMUST00000089752 8190 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm25276-201ENSMUST00000104300 124 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm6746-201ENSMUST00000108774 483 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Borcs8-202ENSMUST00000110139 679 ntAPPRIS ALT2 TSL 3 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm14480-201ENSMUST00000118521 433 ntBASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 Gm11681-201ENSMUST00000127337 870 ntTSL 2 BASIC7.2□□□□□ -1.26
Upk3aQ9JKX8 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms