Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Ube3bQ9ES34 Gm38130-201ENSMUST00000194311 1761 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm14415-201ENSMUST00000118260 1578 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm37962-201ENSMUST00000195535 2034 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Pkd1-201ENSMUST00000035565 14164 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Wdfy4-202ENSMUST00000130509 10158 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Golga1-201ENSMUST00000039165 4869 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Fhl1-205ENSMUST00000114773 2298 ntTSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Zfp800-201ENSMUST00000035930 3881 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm9877-201ENSMUST00000064271 2627 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Cyld-205ENSMUST00000209532 7990 ntAPPRIS ALT1 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm22934-201ENSMUST00000103961 132 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm14099-201ENSMUST00000117769 605 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm13501-201ENSMUST00000118477 979 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm11838-201ENSMUST00000121999 231 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 6430503K07Rik-201ENSMUST00000144411 476 ntTSL 2 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Ear-ps10-201ENSMUST00000161871 460 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Csnk2b-203ENSMUST00000173114 917 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Astx6-201ENSMUST00000180281 1150 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm4412-201ENSMUST00000186660 433 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm29462-201ENSMUST00000191458 288 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm37800-201ENSMUST00000192129 664 ntTSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm8407-201ENSMUST00000192719 427 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm37148-201ENSMUST00000195097 716 ntTSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm42977-201ENSMUST00000197497 144 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm19104-201ENSMUST00000198392 679 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm44140-201ENSMUST00000204157 675 ntTSL 3 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm44902-201ENSMUST00000206177 805 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm45509-201ENSMUST00000209624 1229 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm18907-201ENSMUST00000209719 932 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm3912-203ENSMUST00000211024 367 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm46191-201ENSMUST00000218899 433 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 AC147615.1-201ENSMUST00000218914 441 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm32300-201ENSMUST00000221735 515 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 AC126805.1-201ENSMUST00000225142 262 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 AC165281.1-201ENSMUST00000225713 1011 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Myo1f-201ENSMUST00000087605 3819 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Orc1-201ENSMUST00000102744 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Ccdc71-202ENSMUST00000193170 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Exoc1-203ENSMUST00000113493 3371 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Vps8-203ENSMUST00000115397 5032 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Fam32a-201ENSMUST00000003123 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm37649-201ENSMUST00000192079 2232 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Pogz-204ENSMUST00000107269 5966 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 1600012P17Rik-201ENSMUST00000062159 2475 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gas7-204ENSMUST00000108682 7067 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Pogz-205ENSMUST00000107270 6399 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Polr1a-201ENSMUST00000055296 9216 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Scoc-201ENSMUST00000081506 1791 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Ank3-247ENSMUST00000218680 5500 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Itgam-205ENSMUST00000120355 3701 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Gm44141-201ENSMUST00000204231 1583 ntBASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Cyp2e1-202ENSMUST00000209253 1582 ntTSL 5 BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ube3bQ9ES34 Slc37a2-202ENSMUST00000161114 2945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Gm3822-201ENSMUST00000201941 2935 ntBASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Gm44986-201ENSMUST00000206292 2829 ntBASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Gm26748-201ENSMUST00000180406 2972 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Ablim3-202ENSMUST00000166783 4213 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Olfr243-202ENSMUST00000215723 4735 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Plec-221ENSMUST00000171562 14944 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Plec-204ENSMUST00000072692 14944 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Drp2-206ENSMUST00000153424 7135 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Map3k19-205ENSMUST00000208183 4865 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Spc25-201ENSMUST00000005365 1352 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Usp3-202ENSMUST00000098613 2797 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Zfp467-207ENSMUST00000114563 463 ntTSL 5 BASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Gm14745-201ENSMUST00000118480 1096 ntBASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Olfr590-ps1-201ENSMUST00000118801 898 ntBASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Gm16200-201ENSMUST00000120385 331 ntBASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Gm26407-201ENSMUST00000158504 307 ntBASIC9.79□□□□□ -0.84
Ube3bQ9ES34 Gm23385-201ENSMUST00000158592 295 ntBASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms