Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 BC049715-202ENSMUST00000163640 744 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm6047-201ENSMUST00000167221 574 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm15100-201ENSMUST00000180357 573 ntTSL 5 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm26784-201ENSMUST00000181666 410 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm27187-202ENSMUST00000184873 606 ntTSL 3 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm38145-201ENSMUST00000192319 693 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm43690-201ENSMUST00000201213 266 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 D830044I16Rik-205ENSMUST00000206296 845 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm45299-201ENSMUST00000210199 420 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Mrpl23-207ENSMUST00000210803 590 ntTSL 3 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm45782-201ENSMUST00000212670 366 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm18972-201ENSMUST00000218873 630 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Cinp-205ENSMUST00000221182 774 ntTSL 3 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Rpl7a-ps1-201ENSMUST00000223350 793 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 AC163667.2-201ENSMUST00000223769 791 ntBASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Itpr1-205ENSMUST00000203615 9761 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm10706-201ENSMUST00000128327 1960 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Vwa3b-206ENSMUST00000169057 1499 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Cyp2b23-201ENSMUST00000077356 2189 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
Sf3a3Q9D554 Gm43483-201ENSMUST00000196724 2860 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Tpbpa-201ENSMUST00000021885 1621 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Zfp2-203ENSMUST00000116378 3069 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Fktn-203ENSMUST00000128667 6080 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm37107-201ENSMUST00000195326 2552 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Slc17a8-201ENSMUST00000020102 4456 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Znhit3-201ENSMUST00000103195 998 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm25762-201ENSMUST00000103984 132 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm23164-201ENSMUST00000175084 111 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm29453-201ENSMUST00000186428 1279 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm8004-201ENSMUST00000187782 617 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm29808-201ENSMUST00000194419 468 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm7285-201ENSMUST00000198801 580 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm44159-201ENSMUST00000204065 442 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm7210-201ENSMUST00000209309 1067 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 4930555G21Rik-201ENSMUST00000221718 537 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 AC121542.2-201ENSMUST00000227529 400 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 AC107452.2-201ENSMUST00000228415 363 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Mill2-202ENSMUST00000072415 1075 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Olfr51-201ENSMUST00000076514 924 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm42820-201ENSMUST00000200084 3063 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm17083-201ENSMUST00000165849 1366 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 AC122878.1-201ENSMUST00000227716 1460 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Gm12021-201ENSMUST00000121061 1746 ntBASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
Sf3a3Q9D554 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm39139-202ENSMUST00000212621 5878 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm32486-201ENSMUST00000209810 3816 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm43876-201ENSMUST00000203831 3229 ntBASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Dcaf1-203ENSMUST00000161758 5539 ntTSL 5 BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm12993-201ENSMUST00000119900 479 ntBASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm10182-201ENSMUST00000178676 273 ntBASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Mir7230-201ENSMUST00000195977 56 ntBASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm8268-201ENSMUST00000209683 458 ntBASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm45432-201ENSMUST00000210391 416 ntBASIC7.4□□□□□ -1.22
Sf3a3Q9D554 1700047G07Rik-202ENSMUST00000212351 842 ntTSL 5 BASIC7.4□□□□□ -1.22
Sf3a3Q9D554 Gm5194-201ENSMUST00000221457 742 ntBASIC7.4□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms