Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Gm17833-201ENSMUST00000197629 1065 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm40304-201ENSMUST00000202154 268 ntTSL 3 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm5305-201ENSMUST00000204010 746 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm7419-201ENSMUST00000209962 925 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 AC106830.2-201ENSMUST00000226624 943 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 AC154649.2-201ENSMUST00000228189 808 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 AC161537.1-202ENSMUST00000228450 868 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Clec4n-201ENSMUST00000024118 1229 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm5250-201ENSMUST00000059065 321 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Rps19-ps4-201ENSMUST00000091925 438 ntBASIC6.7□□□□□ -1.34
Scrt1Q99M85 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Tnfrsf11b-201ENSMUST00000079772 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm6567-201ENSMUST00000205529 2095 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Cldn2-201ENSMUST00000054889 3044 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Ubl7-209ENSMUST00000216925 1319 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Kctd16-201ENSMUST00000091927 1349 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Nrf1-204ENSMUST00000115199 2296 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
Scrt1Q99M85 Gm17229-202ENSMUST00000166792 1753 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Tmem100-201ENSMUST00000092788 1767 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Wdr44-202ENSMUST00000101670 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm3892-202ENSMUST00000178043 3539 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm10593-201ENSMUST00000178906 3539 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm26813-201ENSMUST00000180778 3587 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gucy1b2-203ENSMUST00000165651 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm45534-201ENSMUST00000211449 2339 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm25760-201ENSMUST00000103989 132 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Rnf170-203ENSMUST00000110575 966 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm15778-201ENSMUST00000118469 608 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm11443-201ENSMUST00000118790 479 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm13735-201ENSMUST00000120217 670 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm9378-201ENSMUST00000120315 471 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm7746-201ENSMUST00000120966 503 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm12455-201ENSMUST00000121242 416 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Mir1900-201ENSMUST00000122714 78 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Fbxl12-210ENSMUST00000155301 476 ntTSL 3 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm25989-201ENSMUST00000158761 133 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Olfr760-ps1-201ENSMUST00000172563 748 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm5973-201ENSMUST00000178542 496 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm21312-202ENSMUST00000180889 1246 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm21304-202ENSMUST00000181059 1246 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm8764-202ENSMUST00000181179 1246 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm6763-202ENSMUST00000181287 1246 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm21293-203ENSMUST00000181634 1246 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm20765-202ENSMUST00000181703 1246 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 AC153567.1-201ENSMUST00000218424 1263 ntTSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 CT030705.2-201ENSMUST00000225301 556 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 AC099629.1-201ENSMUST00000226778 464 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Olfr1113-201ENSMUST00000079966 981 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm6887-201ENSMUST00000080945 482 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gatad2b-204ENSMUST00000199607 2418 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Oas1e-203ENSMUST00000201172 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm6493-201ENSMUST00000159889 1786 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 AC151984.1-201ENSMUST00000218261 2976 ntBASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Scrt1Q99M85 Gm42595-201ENSMUST00000196771 1607 ntBASIC6.68□□□□□ -1.34
Scrt1Q99M85 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scrt1Q99M85 Sipa1l1-201ENSMUST00000053969 7488 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
Scrt1Q99M85 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Scrt1Q99M85 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Scrt1Q99M85 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
Scrt1Q99M85 Slc17a6-201ENSMUST00000032710 4137 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scrt1Q99M85 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scrt1Q99M85 Naa11-201ENSMUST00000060265 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scrt1Q99M85 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Scrt1Q99M85 3632451O06Rik-201ENSMUST00000036972 8831 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms