Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm44141-201ENSMUST00000204231 1583 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 1810018F18Rik-202ENSMUST00000189546 1447 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm13458-201ENSMUST00000118239 367 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm13407-201ENSMUST00000118256 360 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Bambi-ps1-201ENSMUST00000121525 592 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm11838-201ENSMUST00000121999 231 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm26357-201ENSMUST00000158218 115 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm23207-201ENSMUST00000158665 102 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm7031-201ENSMUST00000173709 919 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm26738-201ENSMUST00000181312 601 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm42977-201ENSMUST00000197497 144 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm42489-201ENSMUST00000198964 669 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm44245-201ENSMUST00000204304 232 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm30196-201ENSMUST00000208957 160 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm44683-201ENSMUST00000209088 484 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm45712-201ENSMUST00000212417 335 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm32842-201ENSMUST00000212653 738 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm17950-201ENSMUST00000214617 646 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm39456-201ENSMUST00000214759 1019 ntTSL 5 BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm4800-201ENSMUST00000215776 1266 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Rpl32l-201ENSMUST00000216127 399 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm33684-201ENSMUST00000221119 263 ntTSL 3 BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm19189-201ENSMUST00000221689 754 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 9430031K09Rik-201ENSMUST00000222913 925 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm17229-201ENSMUST00000097355 1138 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Vps39-202ENSMUST00000102501 4384 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Klf6-201ENSMUST00000000080 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm45902-201ENSMUST00000124331 4314 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm44022-201ENSMUST00000203708 5429 ntBASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Ppp2r5c-202ENSMUST00000109832 4108 ntTSL 2 BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Bmx-202ENSMUST00000112265 3005 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Recql5-201ENSMUST00000021097 3971 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Tmem175-201ENSMUST00000063272 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Ccdc87Q8CDL9 AC122878.1-201ENSMUST00000227716 1460 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Frmd7-201ENSMUST00000060650 2112 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Arhgap32-201ENSMUST00000168954 8703 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Npr3-204ENSMUST00000228489 1969 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm12838-201ENSMUST00000116278 325 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm9506-201ENSMUST00000118516 320 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm14824-201ENSMUST00000119421 737 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm12124-201ENSMUST00000120504 679 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm14642-201ENSMUST00000147357 470 ntTSL 3 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Apol11a-201ENSMUST00000172191 1132 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm7393-201ENSMUST00000172650 739 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm4246-201ENSMUST00000172822 216 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm8974-201ENSMUST00000175770 479 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm19035-202ENSMUST00000194575 959 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm37901-201ENSMUST00000195107 514 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm7478-201ENSMUST00000201054 581 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 A930002H02Rik-201ENSMUST00000208672 1178 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 AC155934.1-201ENSMUST00000213802 322 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 AC153561.1-201ENSMUST00000215943 469 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm18024-201ENSMUST00000218516 690 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 AC163667.2-201ENSMUST00000223769 791 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Capsl-201ENSMUST00000042360 949 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Iba57-202ENSMUST00000069631 864 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 6720489N17Rik-201ENSMUST00000091563 318 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Olfr1211-201ENSMUST00000099808 936 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 Gm28583-201ENSMUST00000188903 2141 ntBASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 C8a-202ENSMUST00000064873 3617 ntAPPRIS P3 TSL 1 (best) BASIC8.06□□□□□ -1.12
Ccdc87Q8CDL9 4930511E03Rik-201ENSMUST00000203778 2232 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 120.6 ms