Protein–RNA interactions for Protein: Q8CCH2

Nhlrc3, NHL repeat-containing protein 3, mousemouse

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc3Q8CCH2 Pcdh9-204ENSMUST00000193901 6127 ntAPPRIS ALT1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 AC135083.2-201ENSMUST00000228599 1456 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gpbp1l1-201ENSMUST00000030460 3588 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm43229-201ENSMUST00000201812 1850 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm42898-201ENSMUST00000200370 3073 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Rfpl4-202ENSMUST00000179971 1445 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Slc17a3-201ENSMUST00000039721 4276 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm13456-201ENSMUST00000118928 1365 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gcsam-201ENSMUST00000023339 3315 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Zfp397-201ENSMUST00000060762 5472 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Lbhd1-202ENSMUST00000187504 3164 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm23192-201ENSMUST00000102434 96 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Rps27a-201ENSMUST00000102844 637 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm11951-201ENSMUST00000116005 431 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Olfr634-ps1-201ENSMUST00000119267 955 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Fau-ps2-201ENSMUST00000119333 371 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm15220-201ENSMUST00000120730 379 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm11895-201ENSMUST00000122165 467 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm13269-201ENSMUST00000143458 655 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Krr1-204ENSMUST00000174653 972 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 n-R5s115-201ENSMUST00000179019 119 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm26977-201ENSMUST00000183151 996 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm27288-201ENSMUST00000184215 80 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm27597-201ENSMUST00000184365 80 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Mir6912-201ENSMUST00000184456 70 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm27506-201ENSMUST00000184558 80 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm27529-201ENSMUST00000184975 80 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm27907-201ENSMUST00000185101 80 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm28065-201ENSMUST00000185290 833 ntTSL 3 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 1700025H01Rik-201ENSMUST00000187479 547 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm29250-201ENSMUST00000191372 368 ntTSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm37425-201ENSMUST00000193184 432 ntTSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm37371-201ENSMUST00000194837 392 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm37929-201ENSMUST00000195116 493 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm37561-201ENSMUST00000195221 368 ntTSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm43805-201ENSMUST00000198488 824 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm19211-201ENSMUST00000200251 1206 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm18995-201ENSMUST00000202981 520 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm5723-201ENSMUST00000203096 432 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 AC132474.3-201ENSMUST00000213244 383 ntTSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 AL645704.1-201ENSMUST00000221642 604 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm5374-202ENSMUST00000222910 314 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Serpina3h-201ENSMUST00000049922 1239 ntTSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Glipr1-201ENSMUST00000074805 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 n-R5s193-201ENSMUST00000082864 109 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Olfr17-201ENSMUST00000098138 948 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 AC124581.3-201ENSMUST00000224270 1624 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Tex14-201ENSMUST00000060835 4763 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Adgrg6-201ENSMUST00000041168 6507 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Nhlrc3Q8CCH2 Dock8-201ENSMUST00000025831 7810 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 Gm18957-201ENSMUST00000197623 1813 ntBASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 AC154141.1-201ENSMUST00000208403 4136 ntBASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 Gm37952-202ENSMUST00000192516 1497 ntTSL 5 BASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 Gm37483-201ENSMUST00000194382 1484 ntBASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 Gm42603-201ENSMUST00000199893 2146 ntBASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 Ttc39d-202ENSMUST00000134652 2438 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 Etv1-201ENSMUST00000095767 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Nhlrc3Q8CCH2 Zfp964-201ENSMUST00000169125 1416 ntTSL 3 BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Dnajc8-202ENSMUST00000094657 1401 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 AC154270.2-201ENSMUST00000226755 2306 ntBASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gm37968-201ENSMUST00000195131 3201 ntBASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gm26831-201ENSMUST00000181458 1380 ntBASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 AC112680.1-201ENSMUST00000215435 1349 ntBASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Rdh1-201ENSMUST00000073639 3930 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Kyat3-202ENSMUST00000106218 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Odam-201ENSMUST00000113274 872 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gm13229-201ENSMUST00000118238 340 ntBASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gm14212-201ENSMUST00000122023 826 ntBASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gimap6-203ENSMUST00000126422 425 ntTSL 3 BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 BC016548-201ENSMUST00000144657 640 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Nhlrc3Q8CCH2 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 109.5 ms