Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Cep41-202ENSMUST00000115130 485 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm12692-201ENSMUST00000121092 546 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Serpina4-ps1-201ENSMUST00000166601 1287 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm7502-201ENSMUST00000169235 733 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Mthfr-ps1-201ENSMUST00000174153 601 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm26505-201ENSMUST00000176208 166 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm43471-201ENSMUST00000197550 467 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm40319-201ENSMUST00000199785 481 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm42723-201ENSMUST00000199966 1044 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 4930550C14Rik-204ENSMUST00000217318 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 AC162183.1-201ENSMUST00000224843 472 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 AC165287.1-201ENSMUST00000224985 178 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Asxl2-201ENSMUST00000092003 11934 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm37022-201ENSMUST00000192517 2254 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 AC164883.2-201ENSMUST00000227931 3815 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm9125-201ENSMUST00000178458 2233 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.88□□□□□ -0.99
Vps53Q8CCB4 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Baz2b-201ENSMUST00000090925 7576 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Vps53Q8CCB4 Rubcnl-201ENSMUST00000036072 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 4932414J04Rik-201ENSMUST00000152483 3059 ntTSL 2 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Olfr1441-202ENSMUST00000214153 2078 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm18701-201ENSMUST00000188281 1536 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm24462-201ENSMUST00000102430 106 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm22439-201ENSMUST00000104048 132 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm14000-201ENSMUST00000118670 233 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm12959-201ENSMUST00000119396 403 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm12611-201ENSMUST00000119452 1037 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm16174-201ENSMUST00000137373 402 ntTSL 2 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm15351-203ENSMUST00000153095 406 ntTSL 3 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 4933427D06Rik-202ENSMUST00000153517 522 ntTSL 5 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm24923-201ENSMUST00000178201 88 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm28573-201ENSMUST00000187821 380 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm29362-201ENSMUST00000187898 133 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm28145-201ENSMUST00000189742 380 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm28400-201ENSMUST00000191332 380 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm43287-201ENSMUST00000197747 600 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm7151-201ENSMUST00000211511 954 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 AC159246.1-201ENSMUST00000214478 249 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 CT030260.1-201ENSMUST00000223243 442 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 AC161877.2-201ENSMUST00000226248 545 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Anapc15-ps-201ENSMUST00000099328 426 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Adamts6-203ENSMUST00000224208 6480 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Zfp438-201ENSMUST00000063989 3209 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Vps53Q8CCB4 Gm38315-201ENSMUST00000194286 2437 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Selenoi-203ENSMUST00000145167 6803 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Scaper-202ENSMUST00000214747 5231 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm34653-201ENSMUST00000201786 1658 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Ftmt-201ENSMUST00000025388 1451 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Igkv2-137-201ENSMUST00000103302 501 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm15160-201ENSMUST00000120553 907 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gtsf1-209ENSMUST00000153930 799 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Mir1968-201ENSMUST00000157429 68 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Gm20452-201ENSMUST00000174686 513 ntBASIC8.86□□□□□ -0.99
Vps53Q8CCB4 Pid1-205ENSMUST00000176720 450 ntTSL 5 BASIC8.86□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms