Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm25926-201ENSMUST00000082899 160 ntBASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Cspp1-217ENSMUST00000186294 3429 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm38386-201ENSMUST00000194293 3421 ntBASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Osbpl6-201ENSMUST00000077972 8037 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 H60c-201ENSMUST00000170893 2817 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Cd200r4-203ENSMUST00000176819 1796 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gabrb3-202ENSMUST00000085240 5712 ntTSL 5 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm9866-203ENSMUST00000182592 8487 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Psmd10-202ENSMUST00000112978 1390 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trub1Q8C0D0 Gm37321-201ENSMUST00000195742 1872 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Carf-209ENSMUST00000187978 5463 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Trim60-201ENSMUST00000048565 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm7086-201ENSMUST00000219083 1482 ntTSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm33027-201ENSMUST00000206093 4664 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Trpc4-201ENSMUST00000029311 3473 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Ogfod1-201ENSMUST00000060632 5214 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Dusp3-206ENSMUST00000151678 4084 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm25167-201ENSMUST00000104188 120 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm15913-201ENSMUST00000118492 331 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 2810403D21Rik-201ENSMUST00000123040 601 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Babam2-205ENSMUST00000131995 1220 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Wdr83os-202ENSMUST00000140621 630 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm13427-201ENSMUST00000154296 794 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm4835-201ENSMUST00000155839 972 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 1810022K09Rik-202ENSMUST00000185384 435 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm5920-201ENSMUST00000187390 853 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm28164-201ENSMUST00000190143 442 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm8058-201ENSMUST00000217247 587 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm2089-201ENSMUST00000218294 479 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 AC110176.1-201ENSMUST00000226219 504 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 AC124715.1-201ENSMUST00000228480 754 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Wdr66-201ENSMUST00000069311 978 ntTSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm7493-201ENSMUST00000085919 626 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Hepacam2-201ENSMUST00000049985 2328 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Myot-202ENSMUST00000115498 2087 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm37457-201ENSMUST00000193639 2433 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Trp53cor1-201ENSMUST00000133221 2956 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 1700031F05Rik-201ENSMUST00000048061 1361 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Gm37510-201ENSMUST00000194151 4762 ntBASIC7.7□□□□□ -1.18
Trub1Q8C0D0 Ctnnd1-201ENSMUST00000036811 5126 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Casr-202ENSMUST00000114847 4303 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 4930442L01Rik-201ENSMUST00000145865 2077 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm16072-201ENSMUST00000119574 2377 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm37984-201ENSMUST00000191641 3733 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm13313-201ENSMUST00000118938 1084 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm14016-201ENSMUST00000119095 486 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm11622-201ENSMUST00000120525 691 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm14048-201ENSMUST00000121864 1268 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm14380-201ENSMUST00000122298 431 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Trav8-2-201ENSMUST00000130122 337 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 A230072E10Rik-201ENSMUST00000146161 676 ntTSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Zfp652os-201ENSMUST00000155531 537 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm17234-201ENSMUST00000172128 392 ntTSL 3 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm3149-203ENSMUST00000179649 618 ntAPPRIS ALT2 TSL 2 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm5839-201ENSMUST00000182835 1007 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm6931-201ENSMUST00000183103 371 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 2010308F09Rik-202ENSMUST00000186931 578 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm3476-203ENSMUST00000190582 612 ntTSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm37392-201ENSMUST00000192098 516 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Gm44356-201ENSMUST00000196731 111 ntBASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Hax1-204ENSMUST00000197725 648 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Cnot2-201ENSMUST00000020374 1059 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trub1Q8C0D0 Smarca2-238ENSMUST00000208589 1054 ntTSL 5 BASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms